| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488139
Identifier: 103488139
GI number: 103488139
Start: 2807655
End: 2807969
Strand: Direct
Name: 103488139
Synonym: Sala_2662
Alternate gene names: NA
Gene position: 2807655-2807969 (Clockwise)
Preceding gene: 103488138
Following gene: 103488142
Centisome position: 83.93
GC content: 58.41
Gene sequence:
>315_bases ATGACAGCATTCCGTGTTTCGGCAATCGCGAGCCGGCGGCTCGACGAGATTTTTGTCTATTCGCTCGACACATGGGGCCA GGAGCAGGCCGAAACCTATATCCGTGAGTTGTTTGCCTGCTTCGACCGGATCGCGCGCCGCGAATTGCTCTGGCGCGCGA TACCGGCCGAATTCAGCGTCGATGGTTATTATTGCCGCCACGAACATCACTACGTCTATTGGCGGCTGCTCGCCGATGGC GATGTCGGGATCGTCACTATCCTGCACGAGCGCATGCACCAGATGGACCGTTTCCGCGAGGATGATGGCGCTTGA
Upstream 100 bases:
>100_bases CGCCTGAAAGCGGAACTGACGCGCGCCTTCGCTGCCCCCGAAGACAGCTATGACGCATTGGATGCCGAGGCCGTGATCGC CCGCAATCGCCGGGCGTGAC
Downstream 100 bases:
>100_bases GATCGCTCGCCGGCGATCGGCGTTATGGTGACAGCGTGCTCGCGCCCGGCGCCGATCCCCGGTGGAGGATGTGTTCACCC TCGACCAGCGATCCGGCGCG
Product: plasmid stabilization system protein
Products: NA
Alternate protein names: Plasmid Stabilization System
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTAFRVSAIASRRLDEIFVYSLDTWGQEQAETYIRELFACFDRIARRELLWRAIPAEFSVDGYYCRHEHHYVYWRLLADG DVGIVTILHERMHQMDRFREDDGA
Sequences:
>Translated_104_residues MTAFRVSAIASRRLDEIFVYSLDTWGQEQAETYIRELFACFDRIARRELLWRAIPAEFSVDGYYCRHEHHYVYWRLLADG DVGIVTILHERMHQMDRFREDDGA >Mature_103_residues TAFRVSAIASRRLDEIFVYSLDTWGQEQAETYIRELFACFDRIARRELLWRAIPAEFSVDGYYCRHEHHYVYWRLLADGD VGIVTILHERMHQMDRFREDDGA
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12475; Mature: 12344
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFRVSAIASRRLDEIFVYSLDTWGQEQAETYIRELFACFDRIARRELLWRAIPAEFSV CCCHHHHHHHHHCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGYYCRHEHHYVYWRLLADGDVGIVTILHERMHQMDRFREDDGA CCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAFRVSAIASRRLDEIFVYSLDTWGQEQAETYIRELFACFDRIARRELLWRAIPAEFSV CCHHHHHHHHHCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGYYCRHEHHYVYWRLLADGDVGIVTILHERMHQMDRFREDDGA CCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA