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The map label for this gene is yncC [C]

Identifier: 103488069

GI number: 103488069

Start: 2733473

End: 2734087

Strand: Direct

Name: yncC [C]

Synonym: Sala_2591

Alternate gene names: 103488069

Gene position: 2733473-2734087 (Clockwise)

Preceding gene: 103488068

Following gene: 103488070

Centisome position: 81.71

GC content: 63.9

Gene sequence:

>615_bases
ATGAGCCCCGCCTATGTTCTCGAGCCGACCTACGATACGCTGAGGCGGCGGCTGTTCGCCGGCGTCTGGCCGTCGGGGCA
GCGCCTTGAAGCCGCCCGGCTCGCTGCTGAGCTTGGCGTCAGCATGACGCCCGTGCGCGACAGTCTCAATCGGCTTGCGG
GCGAACGTCTGGTTCACTCGTCGCCCGGCGAAGGATTCCAGGTTCCCCTGCTCAGCGAAACCGAGCTTCGGGGACTTATA
GACTGGCATCGCGCTCTCATAGACGTTGCACTTGGACCCCGGGGGACAATCGCGATGCCCACGGAATTACCGCAAGGCCA
TGACGGTATCGGCGAGCGCACGGCGATCCTGTTTACGGCAATCGCAAGTACGGCACAAAGCCTCGAGCTTCACTGGGCTC
TCGGCAATGCCGCTGCGCGCCTCGGCTGTTATCGGCGACATGAGGAAACCGTGCTCGATGACGCGCATTCGGAACTGGCC
GCTCTTGAAGCGCTTGTGCGCGTGGGAAAGCGCGATGGGCTGGTGCGGGCAATCGAGCGGTATCATGACCGCCGCCGCAC
CGTTGCCGGTGATCTGGTGCATGCTGCCCGCTATGCCGGATCCTCTGATGCGTGA

Upstream 100 bases:

>100_bases
GGCGATCGCGTGCCTGAGAACATCGGGGCGATCGACGCGCTCCGGCCCGATCAGGAAGCAATGATAGAAGGCTTCGGCCA
GCCCGCTTGGGGCTGAACCT

Downstream 100 bases:

>100_bases
AGCCGGATCGCACATGGCACTCAATCCCAAGAACGGAACCACAGGGAGGAAGATGATGACGAAGAAGAAGCTGATCCTGA
CGGTGCTCACAGGCCCGTTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: GntR Family Transcriptional Regulator; Regulatory Protein GntR HTH

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSPAYVLEPTYDTLRRRLFAGVWPSGQRLEAARLAAELGVSMTPVRDSLNRLAGERLVHSSPGEGFQVPLLSETELRGLI
DWHRALIDVALGPRGTIAMPTELPQGHDGIGERTAILFTAIASTAQSLELHWALGNAAARLGCYRRHEETVLDDAHSELA
ALEALVRVGKRDGLVRAIERYHDRRRTVAGDLVHAARYAGSSDA

Sequences:

>Translated_204_residues
MSPAYVLEPTYDTLRRRLFAGVWPSGQRLEAARLAAELGVSMTPVRDSLNRLAGERLVHSSPGEGFQVPLLSETELRGLI
DWHRALIDVALGPRGTIAMPTELPQGHDGIGERTAILFTAIASTAQSLELHWALGNAAARLGCYRRHEETVLDDAHSELA
ALEALVRVGKRDGLVRAIERYHDRRRTVAGDLVHAARYAGSSDA
>Mature_203_residues
SPAYVLEPTYDTLRRRLFAGVWPSGQRLEAARLAAELGVSMTPVRDSLNRLAGERLVHSSPGEGFQVPLLSETELRGLID
WHRALIDVALGPRGTIAMPTELPQGHDGIGERTAILFTAIASTAQSLELHWALGNAAARLGCYRRHEETVLDDAHSELAA
LEALVRVGKRDGLVRAIERYHDRRRTVAGDLVHAARYAGSSDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22277; Mature: 22145

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAYVLEPTYDTLRRRLFAGVWPSGQRLEAARLAAELGVSMTPVRDSLNRLAGERLVHS
CCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
SPGEGFQVPLLSETELRGLIDWHRALIDVALGPRGTIAMPTELPQGHDGIGERTAILFTA
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHH
IASTAQSLELHWALGNAAARLGCYRRHEETVLDDAHSELAALEALVRVGKRDGLVRAIER
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YHDRRRTVAGDLVHAARYAGSSDA
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SPAYVLEPTYDTLRRRLFAGVWPSGQRLEAARLAAELGVSMTPVRDSLNRLAGERLVHS
CCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
SPGEGFQVPLLSETELRGLIDWHRALIDVALGPRGTIAMPTELPQGHDGIGERTAILFTA
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHH
IASTAQSLELHWALGNAAARLGCYRRHEETVLDDAHSELAALEALVRVGKRDGLVRAIER
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YHDRRRTVAGDLVHAARYAGSSDA
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA