Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487974

Identifier: 103487974

GI number: 103487974

Start: 2634905

End: 2635147

Strand: Reverse

Name: 103487974

Synonym: Sala_2495

Alternate gene names: NA

Gene position: 2635147-2634905 (Counterclockwise)

Preceding gene: 103487975

Following gene: 103487973

Centisome position: 78.77

GC content: 70.78

Gene sequence:

>243_bases
ATGACCCCCGCGCACCCTCCCCGTTATCTGAGGACCCCTGACGCGGCGCGCCGCGTCGGCCTCTCGCCGCGAACGCTCGA
AAAGCATCGCTGCTATGGCACCGGCCCGGCCTATCGCAAACTCGGTGGGCGCGTGGTCTATGCGATCGACGAACTCGATG
CATGGGTCGAACTCGGGCGGCGCTCGTCGACCTCCGATCCGGGCGTCGGCACCGTGCACCCGGCGCGCCGGGGGCTCGCC
TGA

Upstream 100 bases:

>100_bases
CGGCGATTCAGCCGCTCCCCCGCGCTCCCGCTTTCGCGCCACGACGCCCCATCGCGCGCTGCCCCGCCTTTTCGGGAGCC
GCCGCGGGAAGGAGCATCCC

Downstream 100 bases:

>100_bases
TGCCGCGCGCTGTCGCAGCGCCCGGCGTTTCGCTCTCCCGCCCCGGCCACGGTAGCGGATGTGTTTCCGCGTCGCCCCAC
GGCTGCGGCTTGACTGAGGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Phage Transcriptional Regulator AlpA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MTPAHPPRYLRTPDAARRVGLSPRTLEKHRCYGTGPAYRKLGGRVVYAIDELDAWVELGRRSSTSDPGVGTVHPARRGLA

Sequences:

>Translated_80_residues
MTPAHPPRYLRTPDAARRVGLSPRTLEKHRCYGTGPAYRKLGGRVVYAIDELDAWVELGRRSSTSDPGVGTVHPARRGLA
>Mature_79_residues
TPAHPPRYLRTPDAARRVGLSPRTLEKHRCYGTGPAYRKLGGRVVYAIDELDAWVELGRRSSTSDPGVGTVHPARRGLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8795; Mature: 8664

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAHPPRYLRTPDAARRVGLSPRTLEKHRCYGTGPAYRKLGGRVVYAIDELDAWVELGR
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHCC
RSSTSDPGVGTVHPARRGLA
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPAHPPRYLRTPDAARRVGLSPRTLEKHRCYGTGPAYRKLGGRVVYAIDELDAWVELGR
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHCC
RSSTSDPGVGTVHPARRGLA
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA