Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487960

Identifier: 103487960

GI number: 103487960

Start: 2619988

End: 2620242

Strand: Reverse

Name: 103487960

Synonym: Sala_2481

Alternate gene names: NA

Gene position: 2620242-2619988 (Counterclockwise)

Preceding gene: 103487961

Following gene: 103487959

Centisome position: 78.33

GC content: 67.84

Gene sequence:

>255_bases
ATGGGCCGGGCGGGCAAGCTCACGGTCGGTGCGGTCATCGGAGGCATGGCGCTGACGATCGCTCTTATGGCCGCGCTGGA
CCCGCCCGCGCCCCGTGCGTCCGCTCTCCCTCAGATCTCCGGAGCGGACGCACGACCCAATCTGAAAGACACGCTGCGCC
GCTGCCGCACAGTCACCGTCGCCGATGCCGAGTGTGAGGCCGCGTGGGAGGCGAAGCGCCGCCATTTCTTCGGCGAGGAA
GAGGATGAGAAATGA

Upstream 100 bases:

>100_bases
GCCGCACAGGGCCGCGCCGAAATGCTCGATGCCGCACGCGCCGCCGCCGCGGAAGCCGAGGGCCGCGAACGCTTCCGCCG
CTTCCGCAAGGGCAATTGAG

Downstream 100 bases:

>100_bases
ACGATACGGGCGTCATCGACCAATTCCTGTCGGTCTTCTCGACCTATATCGATAGCGGCTTCGGGCTACTCGGCGGCGAG
GTCGGCTTCCTCTCCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGRAGKLTVGAVIGGMALTIALMAALDPPAPRASALPQISGADARPNLKDTLRRCRTVTVADAECEAAWEAKRRHFFGEE
EDEK

Sequences:

>Translated_84_residues
MGRAGKLTVGAVIGGMALTIALMAALDPPAPRASALPQISGADARPNLKDTLRRCRTVTVADAECEAAWEAKRRHFFGEE
EDEK
>Mature_83_residues
GRAGKLTVGAVIGGMALTIALMAALDPPAPRASALPQISGADARPNLKDTLRRCRTVTVADAECEAAWEAKRRHFFGEEE
DEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8949; Mature: 8818

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAGKLTVGAVIGGMALTIALMAALDPPAPRASALPQISGADARPNLKDTLRRCRTVTV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
ADAECEAAWEAKRRHFFGEEEDEK
CCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GRAGKLTVGAVIGGMALTIALMAALDPPAPRASALPQISGADARPNLKDTLRRCRTVTV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
ADAECEAAWEAKRRHFFGEEEDEK
CCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA