| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is adhA [H]
Identifier: 103487934
GI number: 103487934
Start: 2596523
End: 2597548
Strand: Direct
Name: adhA [H]
Synonym: Sala_2455
Alternate gene names: 103487934
Gene position: 2596523-2597548 (Clockwise)
Preceding gene: 103487933
Following gene: 103487935
Centisome position: 77.62
GC content: 65.59
Gene sequence:
>1026_bases ATGGCGAAAACCATGAAGGCGGCGGTCGTCCGCGAATTCGGTAAGCCGCTGGTCATCGAAGAAGCGCCGATCCCGACGGT CGGACCCGGCCAGATCCTGGTAAAGGTCGCGGCGGCCGGCGTATGCCACACCGACCTGCATGCGGCCGAGGGCGACTGGC CGGTCAAGCCCAACCCGCCCTTCATTCCCGGGCATGAAGGCGTCGGACATGTCGCCGCCGTCGGATCGGGCGTCACTCTC ATAAAAGAGGGCGACCGGGTCGGCGTCCCCTGGCTCTACTCCGCCTGCGGGCATTGCGTGCATTGCCTGGGCGGCTGGGA GACGTTGTGCGAGAGCCAGCAGAATACCGGCTATTCGGTGAATGGCAGCTTCGCGGAATATGTCCTCGCCGATCCAAATT ATGTCGGGCATCTTCCCGACAATGTCGACTTCCTCGACATCGCGCCGATCCTCTGCGCCGGCGTCACCGTCTATAAAGGG CTGAAGGCCACCGAGGCGAAGCCCGGAGAGTGGGTGGTCGTCTCCGGGATCGGCGGGCTCGGCCACATGGCGGTGCAATA TGCCCGCGCGATGGGTCTCAATGTGGCGGCGGTCGACGTCGACGACCGCAAGCTCGATCTCGCGACCCGTCTCGGCGCGG CGCTCACGGTCAACGCGCGCGAGGAGGATCCGTCAGCCGCCATCAAGCAGGCGATCGACGGTGCGCAGGGCGTCCTCGTC ACCGCGGTCTCGCCCAAGGCCTTCCAGCAGGCGCTCGGCATGGTCCGGCGCGGTGGTACGGTCGCGCTCAACGGCCTTCC ACCGGGCGATTTTCCGCTGTCGATCTTCGACACCGTACTCAACGGCATCACCGTTCGCGGTTCGATCGTCGGCACCCGGC TCGACCTTCTCGAAGCACTGGCCTTCGCCGGCGAAGGCAAGGTGCATGCGACGGTGCACGCCGAAAAGCTGGAGAACATC AACGACGTCTTTGCGCGCATGCGCCGCGGCGACATTGACGGGCGGATCGTTCTCGATCTGGCCTGA
Upstream 100 bases:
>100_bases GATGATGCTCGACCATTATCAGCAGACCAAGAACCTGCTCGTCTCCTATGACGAGCATGCGCTCGGCCTGTTCTGATCCC TCCCGGAAGGAGAAGCAGAC
Downstream 100 bases:
>100_bases CCATCTTCTGGCGAAAGAAACATTCAATGCCCCTCCTTCATAGCTTGCCGATCGCACGGCGCCACTTCGTTCAGGGGCTG GCGATTGGCGGAGCCGTCGC
Product: alcohol dehydrogenase GroES-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAKTMKAAVVREFGKPLVIEEAPIPTVGPGQILVKVAAAGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGHVAAVGSGVTL IKEGDRVGVPWLYSACGHCVHCLGGWETLCESQQNTGYSVNGSFAEYVLADPNYVGHLPDNVDFLDIAPILCAGVTVYKG LKATEAKPGEWVVVSGIGGLGHMAVQYARAMGLNVAAVDVDDRKLDLATRLGAALTVNAREEDPSAAIKQAIDGAQGVLV TAVSPKAFQQALGMVRRGGTVALNGLPPGDFPLSIFDTVLNGITVRGSIVGTRLDLLEALAFAGEGKVHATVHAEKLENI NDVFARMRRGDIDGRIVLDLA
Sequences:
>Translated_341_residues MAKTMKAAVVREFGKPLVIEEAPIPTVGPGQILVKVAAAGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGHVAAVGSGVTL IKEGDRVGVPWLYSACGHCVHCLGGWETLCESQQNTGYSVNGSFAEYVLADPNYVGHLPDNVDFLDIAPILCAGVTVYKG LKATEAKPGEWVVVSGIGGLGHMAVQYARAMGLNVAAVDVDDRKLDLATRLGAALTVNAREEDPSAAIKQAIDGAQGVLV TAVSPKAFQQALGMVRRGGTVALNGLPPGDFPLSIFDTVLNGITVRGSIVGTRLDLLEALAFAGEGKVHATVHAEKLENI NDVFARMRRGDIDGRIVLDLA >Mature_340_residues AKTMKAAVVREFGKPLVIEEAPIPTVGPGQILVKVAAAGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGHVAAVGSGVTLI KEGDRVGVPWLYSACGHCVHCLGGWETLCESQQNTGYSVNGSFAEYVLADPNYVGHLPDNVDFLDIAPILCAGVTVYKGL KATEAKPGEWVVVSGIGGLGHMAVQYARAMGLNVAAVDVDDRKLDLATRLGAALTVNAREEDPSAAIKQAIDGAQGVLVT AVSPKAFQQALGMVRRGGTVALNGLPPGDFPLSIFDTVLNGITVRGSIVGTRLDLLEALAFAGEGKVHATVHAEKLENIN DVFARMRRGDIDGRIVLDLA
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4501933, Length=359, Percent_Identity=28.4122562674095, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI34577061, Length=359, Percent_Identity=28.133704735376, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI4501929, Length=359, Percent_Identity=28.133704735376, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI71565154, Length=251, Percent_Identity=31.0756972111554, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI262073058, Length=254, Percent_Identity=27.9527559055118, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI71743840, Length=254, Percent_Identity=27.9527559055118, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI71565152, Length=365, Percent_Identity=25.2054794520548, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194239674, Length=299, Percent_Identity=28.7625418060201, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI13236495, Length=299, Percent_Identity=28.7625418060201, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI194239676, Length=242, Percent_Identity=30.5785123966942, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI156523966, Length=239, Percent_Identity=28.4518828451883, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4501939, Length=239, Percent_Identity=28.4518828451883, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI87081918, Length=337, Percent_Identity=45.1038575667656, Blast_Score=250, Evalue=7e-68, Organism=Escherichia coli, GI1786518, Length=323, Percent_Identity=34.3653250773994, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI87082401, Length=337, Percent_Identity=31.4540059347181, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1790045, Length=344, Percent_Identity=30.2325581395349, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1788073, Length=272, Percent_Identity=34.1911764705882, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI87082125, Length=221, Percent_Identity=35.7466063348416, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI226510992, Length=330, Percent_Identity=30, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1786552, Length=242, Percent_Identity=35.1239669421488, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788407, Length=284, Percent_Identity=30.9859154929577, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788075, Length=285, Percent_Identity=30.8771929824561, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1787863, Length=296, Percent_Identity=27.7027027027027, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786825, Length=308, Percent_Identity=28.8961038961039, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=26.605504587156, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790718, Length=201, Percent_Identity=27.363184079602, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562584, Length=342, Percent_Identity=39.4736842105263, Blast_Score=225, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71988145, Length=342, Percent_Identity=36.2573099415205, Blast_Score=210, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17562582, Length=347, Percent_Identity=38.328530259366, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17562876, Length=337, Percent_Identity=31.1572700296736, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17562878, Length=336, Percent_Identity=30.6547619047619, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17507255, Length=266, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25146526, Length=252, Percent_Identity=29.7619047619048, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997431, Length=254, Percent_Identity=29.1338582677165, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319621, Length=345, Percent_Identity=39.7101449275362, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6323961, Length=343, Percent_Identity=39.3586005830904, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324486, Length=343, Percent_Identity=38.4839650145773, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6323729, Length=343, Percent_Identity=38.7755102040816, Blast_Score=232, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6319949, Length=343, Percent_Identity=30.3206997084548, Blast_Score=115, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6323980, Length=319, Percent_Identity=28.5266457680251, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6320033, Length=243, Percent_Identity=32.0987654320988, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6322619, Length=250, Percent_Identity=32.4, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319955, Length=250, Percent_Identity=32.4, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323099, Length=331, Percent_Identity=25.3776435045317, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137530, Length=348, Percent_Identity=27.0114942528736, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI17737897, Length=332, Percent_Identity=26.8072289156627, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737895, Length=252, Percent_Identity=26.984126984127, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 35643; Mature: 35512
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTMKAAVVREFGKPLVIEEAPIPTVGPGQILVKVAAAGVCHTDLHAAEGDWPVKPNPP CCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC FIPGHEGVGHVAAVGSGVTLIKEGDRVGVPWLYSACGHCVHCLGGWETLCESQQNTGYSV CCCCCCCCCHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE NGSFAEYVLADPNYVGHLPDNVDFLDIAPILCAGVTVYKGLKATEAKPGEWVVVSGIGGL CCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCH GHMAVQYARAMGLNVAAVDVDDRKLDLATRLGAALTVNAREEDPSAAIKQAIDGAQGVLV HHHHHHHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEE TAVSPKAFQQALGMVRRGGTVALNGLPPGDFPLSIFDTVLNGITVRGSIVGTRLDLLEAL EEECHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEECEEHHHHHHHHHHH AFAGEGKVHATVHAEKLENINDVFARMRRGDIDGRIVLDLA HHCCCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure AKTMKAAVVREFGKPLVIEEAPIPTVGPGQILVKVAAAGVCHTDLHAAEGDWPVKPNPP CCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC FIPGHEGVGHVAAVGSGVTLIKEGDRVGVPWLYSACGHCVHCLGGWETLCESQQNTGYSV CCCCCCCCCHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE NGSFAEYVLADPNYVGHLPDNVDFLDIAPILCAGVTVYKGLKATEAKPGEWVVVSGIGGL CCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCH GHMAVQYARAMGLNVAAVDVDDRKLDLATRLGAALTVNAREEDPSAAIKQAIDGAQGVLV HHHHHHHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEE TAVSPKAFQQALGMVRRGGTVALNGLPPGDFPLSIFDTVLNGITVRGSIVGTRLDLLEAL EEECHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEECEEHHHHHHHHHHH AFAGEGKVHATVHAEKLENINDVFARMRRGDIDGRIVLDLA HHCCCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9659380; 11481432 [H]