Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487915

Identifier: 103487915

GI number: 103487915

Start: 2574427

End: 2575302

Strand: Direct

Name: 103487915

Synonym: Sala_2436

Alternate gene names: NA

Gene position: 2574427-2575302 (Clockwise)

Preceding gene: 103487912

Following gene: 103487916

Centisome position: 76.96

GC content: 59.25

Gene sequence:

>876_bases
ATGGTACGGAGCCTATATAGCGGGAAGCGATCGGGAATCAAGAAAGGCGAATCGATGAATATGCAGGTTCAGCGCGCGAA
CGAAAGCGCGCCAGCGCACACTGGTGCGGCGGTTTCGGGCAAGCCGCGGGCGACCATCTATCGCATGGTGATGGAGCAGC
ATATCTGCCCCTATGGCCTGAAGGCGCTGCATCTGTTGCGCAGCCGCGGCTATGACGTCGAGGATGTCTGGCTGACGACC
CGCGAGGAAACCGACGCATTCAAGGCGAAACATGGCGTCGCGACGACGCCGCAGACCTTCATCGAAGGCGAGCGGATCGG
CGGTCTTGACGATCTGAGGCGCCATCTCGGTCTGAAAGTCCGCGATCCTAAGGCGCTTACCTATAAGCCCGTCATCGCGC
TCTTCTCTATCACCGCGCTGATGGCGCTGGCCGCCAGCCAAGCGGTGTCGGGCACGCCCTTCACAATCCGTGCCGCCGAA
TGGTTTATCGGGTTCAGCATGGCGTTGCTTGCCTTCCTCAAGCTCCGCGACATCGAGAGCTTCTCGAGCATGTTCCTGAA
CTATGACTTGCTCGCCAAACGCTGGGTACCCTATGCTACCATCTATCCCTTTGCGGAGGGTCTTGCCGGCATCCTGATGA
TTTCTGGCGCGCTGAACTGGATATCGATTCCGGTGGCGCTGTTCATCGGGATCATCGGCGCCGTGTCGGTGTTCAAGGCG
GTGTATATCGACAAGCGCGAACTCAAATGCGCCTGCGTCGGCGGCGACAGCAATGTGCCGCTGGGTTTCATCTCACTGAC
CGAAAATCTGATGATGATCGCCATGGCGCTGTGGATGCTGGTCGCGCCCGCCGCCATGACAATGGGCCATTCTTAA

Upstream 100 bases:

>100_bases
AGGCCGCGGCGTTGGTAATAGCGGATCGTCTCGACATTGACGCCGCCCTGCCGGGCAAGCTGGCCGATGGTCATGTCACG
CAAGGCCTTGACTCCGTACT

Downstream 100 bases:

>100_bases
CGGGTCCGGCGTAACCACGACGGGACAGTCGGCGAACAAGTGAGCGGGATCTCCACCCCGGTTTAGATTGACGCCAAGTT
TGACAAGGATCATGCTTCGA

Product: glutaredoxin

Products: NA

Alternate protein names: Membrane Associated Glutaredoxin; DoxX Subfamily; Glutaredoxin Like Protein; Glutaredoxine Domain-Containing Protein; Heavy Metal Transport/Detoxification Protein

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MVRSLYSGKRSGIKKGESMNMQVQRANESAPAHTGAAVSGKPRATIYRMVMEQHICPYGLKALHLLRSRGYDVEDVWLTT
REETDAFKAKHGVATTPQTFIEGERIGGLDDLRRHLGLKVRDPKALTYKPVIALFSITALMALAASQAVSGTPFTIRAAE
WFIGFSMALLAFLKLRDIESFSSMFLNYDLLAKRWVPYATIYPFAEGLAGILMISGALNWISIPVALFIGIIGAVSVFKA
VYIDKRELKCACVGGDSNVPLGFISLTENLMMIAMALWMLVAPAAMTMGHS

Sequences:

>Translated_291_residues
MVRSLYSGKRSGIKKGESMNMQVQRANESAPAHTGAAVSGKPRATIYRMVMEQHICPYGLKALHLLRSRGYDVEDVWLTT
REETDAFKAKHGVATTPQTFIEGERIGGLDDLRRHLGLKVRDPKALTYKPVIALFSITALMALAASQAVSGTPFTIRAAE
WFIGFSMALLAFLKLRDIESFSSMFLNYDLLAKRWVPYATIYPFAEGLAGILMISGALNWISIPVALFIGIIGAVSVFKA
VYIDKRELKCACVGGDSNVPLGFISLTENLMMIAMALWMLVAPAAMTMGHS
>Mature_291_residues
MVRSLYSGKRSGIKKGESMNMQVQRANESAPAHTGAAVSGKPRATIYRMVMEQHICPYGLKALHLLRSRGYDVEDVWLTT
REETDAFKAKHGVATTPQTFIEGERIGGLDDLRRHLGLKVRDPKALTYKPVIALFSITALMALAASQAVSGTPFTIRAAE
WFIGFSMALLAFLKLRDIESFSSMFLNYDLLAKRWVPYATIYPFAEGLAGILMISGALNWISIPVALFIGIIGAVSVFKA
VYIDKRELKCACVGGDSNVPLGFISLTENLMMIAMALWMLVAPAAMTMGHS

Specific function: Unknown

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31900; Mature: 31900

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSLYSGKRSGIKKGESMNMQVQRANESAPAHTGAAVSGKPRATIYRMVMEQHICPYGL
CCCCHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
KALHLLRSRGYDVEDVWLTTREETDAFKAKHGVATTPQTFIEGERIGGLDDLRRHLGLKV
HHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCEE
RDPKALTYKPVIALFSITALMALAASQAVSGTPFTIRAAEWFIGFSMALLAFLKLRDIES
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
FSSMFLNYDLLAKRWVPYATIYPFAEGLAGILMISGALNWISIPVALFIGIIGAVSVFKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VYIDKRELKCACVGGDSNVPLGFISLTENLMMIAMALWMLVAPAAMTMGHS
HHCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRSLYSGKRSGIKKGESMNMQVQRANESAPAHTGAAVSGKPRATIYRMVMEQHICPYGL
CCCCHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
KALHLLRSRGYDVEDVWLTTREETDAFKAKHGVATTPQTFIEGERIGGLDDLRRHLGLKV
HHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCEE
RDPKALTYKPVIALFSITALMALAASQAVSGTPFTIRAAEWFIGFSMALLAFLKLRDIES
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
FSSMFLNYDLLAKRWVPYATIYPFAEGLAGILMISGALNWISIPVALFIGIIGAVSVFKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VYIDKRELKCACVGGDSNVPLGFISLTENLMMIAMALWMLVAPAAMTMGHS
HHCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA