Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487910

Identifier: 103487910

GI number: 103487910

Start: 2568136

End: 2568612

Strand: Direct

Name: 103487910

Synonym: Sala_2430

Alternate gene names: NA

Gene position: 2568136-2568612 (Clockwise)

Preceding gene: 103487909

Following gene: 103487911

Centisome position: 76.77

GC content: 58.7

Gene sequence:

>477_bases
ATGAGACGACTGACGATTACAGCAATCGCATTGGCCATGCTGGTGGCCGTCCCGGCTCAGGCGACCGAGCCTGCGGATTA
TCAGGGCGCGGCGGCAGCGCTCGCGCAGTATAAATCGGCGATGGAGAAACTGGACCTGACCGGCGTCGAGGCCCTCTTTT
CGCCAGACGCCCAGATATTCGAGTCCGGCGGCGTTGAAGGGAACTTCGCCCACTATCGCGACCATCACATGGGTCCCGAA
CTCAAGGAATTCAAATCCTTCACCTTCCGCAATTACAAGATTTCGGTTCGCGGCGAAGGAAATATCGCGATCGCAACCGA
GACCTACAGCTTCTCGATTGTGCTCGCGAGCGGCGAGACCATCGAACGGGATGGCGTCGCTACGAGTGTCCTCAAACAGG
ACAACGGAAAGTGGCAGATCTTCAATCTCCACAGCTCCTCACGCAAGCCGAAGGTGCGGCCGGCGGGTGGCATCTGA

Upstream 100 bases:

>100_bases
GTCAGCGTCATCGCCAATTCTTTGCGGCTGCGCTTTGCCAGAATCTGATCGAAACCACCGGAGGCACTCGTGAAGTGTCG
GCACAACAAGGGGAAATGAT

Downstream 100 bases:

>100_bases
GCGGGCAAAAAAGGGGCTAGTCCTCACGATCTCTCCGAACCCACACCTAGCAGGACGCATGAGCCCGAGCGGGTGTGGGC
ACCCTGAAATGGCTCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRRLTITAIALAMLVAVPAQATEPADYQGAAAALAQYKSAMEKLDLTGVEALFSPDAQIFESGGVEGNFAHYRDHHMGPE
LKEFKSFTFRNYKISVRGEGNIAIATETYSFSIVLASGETIERDGVATSVLKQDNGKWQIFNLHSSSRKPKVRPAGGI

Sequences:

>Translated_158_residues
MRRLTITAIALAMLVAVPAQATEPADYQGAAAALAQYKSAMEKLDLTGVEALFSPDAQIFESGGVEGNFAHYRDHHMGPE
LKEFKSFTFRNYKISVRGEGNIAIATETYSFSIVLASGETIERDGVATSVLKQDNGKWQIFNLHSSSRKPKVRPAGGI
>Mature_158_residues
MRRLTITAIALAMLVAVPAQATEPADYQGAAAALAQYKSAMEKLDLTGVEALFSPDAQIFESGGVEGNFAHYRDHHMGPE
LKEFKSFTFRNYKISVRGEGNIAIATETYSFSIVLASGETIERDGVATSVLKQDNGKWQIFNLHSSSRKPKVRPAGGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17165; Mature: 17165

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTITAIALAMLVAVPAQATEPADYQGAAAALAQYKSAMEKLDLTGVEALFSPDAQIF
CCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHH
ESGGVEGNFAHYRDHHMGPELKEFKSFTFRNYKISVRGEGNIAIATETYSFSIVLASGET
HCCCCCCCCCCCCCCCCCCCHHHHHHHEEECEEEEEECCCCEEEEEECEEEEEEEECCCE
IERDGVATSVLKQDNGKWQIFNLHSSSRKPKVRPAGGI
ECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLTITAIALAMLVAVPAQATEPADYQGAAAALAQYKSAMEKLDLTGVEALFSPDAQIF
CCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHH
ESGGVEGNFAHYRDHHMGPELKEFKSFTFRNYKISVRGEGNIAIATETYSFSIVLASGET
HCCCCCCCCCCCCCCCCCCCHHHHHHHEEECEEEEEECCCCEEEEEECEEEEEEEECCCE
IERDGVATSVLKQDNGKWQIFNLHSSSRKPKVRPAGGI
ECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA