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The map label for this gene is copD [H]

Identifier: 103487906

GI number: 103487906

Start: 2563090

End: 2564058

Strand: Direct

Name: copD [H]

Synonym: Sala_2426

Alternate gene names: 103487906

Gene position: 2563090-2564058 (Clockwise)

Preceding gene: 103487905

Following gene: 103487907

Centisome position: 76.62

GC content: 67.18

Gene sequence:

>969_bases
GTGGGGGACCCCGTTCTGATCGGCATCAGGTTCGCACTTTATGCGGACCTGATGCTCATCGCCGGCCTTGCTGCGTTCCC
GCTTTTTGCGCTGACACGGAGCGAACGCCTTGCGCCGCAGTCGATGATGGCCTCGATCTGGCGCGCAGAGCGATGGCTCT
GCGCCGCCGGACTGCTTCTCTCCATCTTGGGGATGGGCGTGCTCGCGGCTTCGATGCAGGGTGTGGGGCTCCTCTCCCTG
GAACTCCAGCCTTTTTGGGACCTTGTTCGCGAGACCGAGGTCGGCACAGCCTGGGTCTACCGGAGCGCAGCGCTGCTGCT
CGCGCTGGGAGTCGCGATCTGGATGGTCCGCTGGCCGACAACTTCGGCCGCCGTACTCGCGGCCGCGGGCTCGGTGGCCG
TCGCGAGTCTGGTCTGGTCCGGCCACGCCGGCGCGACCGAAGGCGCCGCAGGCACCGTGCACCGGATCAGCGACATCTTG
CACCTGATTGCAGCGGCGGTCTGGATCGGCGCGATCGGCGCCTTCCTGATCCTGATCTCACCACGTCGTGTCCGCGAATG
GCCGGGCGGACTCCAAATTGCGGCGCGGAGCCTCGATCAATTCTCGCGCGTCGGTACGATCTGCGCCCTCGTCATCGCCG
CCACCGGCCTCGTCAACAGCCAGATGATCGTCGGCGCCGAGAATCTCGGCCGTTCCCTCGGCTCGCCCTATGGACAATTG
CTTCTCGCCAAGCTTGCGCTGTTCGGACTGATGCTGGCGCTCGCGGCGGCGAACCGCTGGCGGCTGACCCCGGCGCTCGC
GGCCGCCGTCCCGGGGACCGATACCGACAATGTCGACGCCGACCCCGACCTCGCGATTGCAGCCATGCGCAGAAGCCTCA
TCATCGAAGCGTCGGCCGCGCTCGCCATACTCGCGCTGGTTGCCTGGTTCGGCACGCTCGAACCCTTCGTCACCGCCGAT
CCGGTTTGA

Upstream 100 bases:

>100_bases
GCCGCTGACAGCCGGAACCTACAAGGTCACATGGTCGGCGGCGGGCGCTGATACCCACCGCATGGGCAGCGAATTCAGCT
TCACCGTAAAGTAAAAGACG

Downstream 100 bases:

>100_bases
CCCCAAGCACCGCCTCTTGGTCGGGTTCGATCATGCTCGGGACCGGCTGGGCGCTCATTGACGCGCGCATCGGGAGCAGC
CGTCCCCATAACCATGTGGC

Product: copper resistance D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MGDPVLIGIRFALYADLMLIAGLAAFPLFALTRSERLAPQSMMASIWRAERWLCAAGLLLSILGMGVLAASMQGVGLLSL
ELQPFWDLVRETEVGTAWVYRSAALLLALGVAIWMVRWPTTSAAVLAAAGSVAVASLVWSGHAGATEGAAGTVHRISDIL
HLIAAAVWIGAIGAFLILISPRRVREWPGGLQIAARSLDQFSRVGTICALVIAATGLVNSQMIVGAENLGRSLGSPYGQL
LLAKLALFGLMLALAAANRWRLTPALAAAVPGTDTDNVDADPDLAIAAMRRSLIIEASAALAILALVAWFGTLEPFVTAD
PV

Sequences:

>Translated_322_residues
MGDPVLIGIRFALYADLMLIAGLAAFPLFALTRSERLAPQSMMASIWRAERWLCAAGLLLSILGMGVLAASMQGVGLLSL
ELQPFWDLVRETEVGTAWVYRSAALLLALGVAIWMVRWPTTSAAVLAAAGSVAVASLVWSGHAGATEGAAGTVHRISDIL
HLIAAAVWIGAIGAFLILISPRRVREWPGGLQIAARSLDQFSRVGTICALVIAATGLVNSQMIVGAENLGRSLGSPYGQL
LLAKLALFGLMLALAAANRWRLTPALAAAVPGTDTDNVDADPDLAIAAMRRSLIIEASAALAILALVAWFGTLEPFVTAD
PV
>Mature_321_residues
GDPVLIGIRFALYADLMLIAGLAAFPLFALTRSERLAPQSMMASIWRAERWLCAAGLLLSILGMGVLAASMQGVGLLSLE
LQPFWDLVRETEVGTAWVYRSAALLLALGVAIWMVRWPTTSAAVLAAAGSVAVASLVWSGHAGATEGAAGTVHRISDILH
LIAAAVWIGAIGAFLILISPRRVREWPGGLQIAARSLDQFSRVGTICALVIAATGLVNSQMIVGAENLGRSLGSPYGQLL
LAKLALFGLMLALAAANRWRLTPALAAAVPGTDTDNVDADPDLAIAAMRRSLIIEASAALAILALVAWFGTLEPFVTADP
V

Specific function: Exact function not known. Involved in copper resistance. Appears to be involved in copper uptake in conjunction with CopC [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788145, Length=317, Percent_Identity=26.1829652996845, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 33696; Mature: 33565

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDPVLIGIRFALYADLMLIAGLAAFPLFALTRSERLAPQSMMASIWRAERWLCAAGLLL
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SILGMGVLAASMQGVGLLSLELQPFWDLVRETEVGTAWVYRSAALLLALGVAIWMVRWPT
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TSAAVLAAAGSVAVASLVWSGHAGATEGAAGTVHRISDILHLIAAAVWIGAIGAFLILIS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRRVREWPGGLQIAARSLDQFSRVGTICALVIAATGLVNSQMIVGAENLGRSLGSPYGQL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHCCHHHHH
LLAKLALFGLMLALAAANRWRLTPALAAAVPGTDTDNVDADPDLAIAAMRRSLIIEASAA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAILALVAWFGTLEPFVTADPV
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GDPVLIGIRFALYADLMLIAGLAAFPLFALTRSERLAPQSMMASIWRAERWLCAAGLLL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SILGMGVLAASMQGVGLLSLELQPFWDLVRETEVGTAWVYRSAALLLALGVAIWMVRWPT
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TSAAVLAAAGSVAVASLVWSGHAGATEGAAGTVHRISDILHLIAAAVWIGAIGAFLILIS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRRVREWPGGLQIAARSLDQFSRVGTICALVIAATGLVNSQMIVGAENLGRSLGSPYGQL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHCCHHHHH
LLAKLALFGLMLALAAANRWRLTPALAAAVPGTDTDNVDADPDLAIAAMRRSLIIEASAA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAILALVAWFGTLEPFVTADPV
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 8449873 [H]