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The map label for this gene is aapJ [H]

Identifier: 103487895

GI number: 103487895

Start: 2551943

End: 2553040

Strand: Reverse

Name: aapJ [H]

Synonym: Sala_2415

Alternate gene names: 103487895

Gene position: 2553040-2551943 (Counterclockwise)

Preceding gene: 103487897

Following gene: 103487894

Centisome position: 76.32

GC content: 64.3

Gene sequence:

>1098_bases
ATGGCGCTAGCATTGAAAGCCTCGTTTATGAATAGGTCGCACGCATCGCGCCGCTGGTTACCGGCGCTGCTCGCCGCAGG
CGCCCTGTTACTCGGCGGCTGCGGCCGCGAGCCCGCCGGCACCGGTGGGCATGAAATCGCCGCGGCGAAGGGGTCGACGC
TTGCGCGGATTCGCGCGCGCGGAACGCTCAATTGCGCAATTCATACGGGGCAGCTCGGCATGTCCTATCTCGACAAGCGC
GGACGCTGGCAGGGCTTCTTCGTCGATTACTGCCGGGCGCTCGCCGCTGCGGTCCTCGGCGATGCCCGCAAGGTCCGGTT
CATGCCGGTCGCCTCGAACAAGCGCTTCACGATCGTGCAGACGGGCGAGGCCGACGTCCTGTCGCGGACGACCACATGGA
CGCTGACGCGCGACACCGACCTCGGGGTGAATTTCGTCGGCACCATGTATTATGACGGGCAGAGCTTCTTGGTGCCCCGG
CGATCGGGCGTGCGGCTTCCGACGGATCTCGATGGCGCATCGATCTGCATCACCAAGGGGACGACCTCCGAACTCAACAC
CGCCGAATATTTCGAGCGCAAGGGGCTGCGTTTCCTGTCGGTCGTGTTCGAGAATCCCGAGGAAGCCAAGCTCGCCTTCT
TTGCCGGGCGGTGCGACGCAATGACCACCGATGCCTTCACGCTGACGGTGATCCGCCTGGCCGACACCGCACATCCCGAC
GATTATGTGGTGCTGCCCGAGCGGCTCACCAAAGAACCGGTCGGCCCAGTCGTGCGCAGCGACGACGAGCAATGGTATGA
GATCAACAAATGGGTGCTGAACGCGCTCTTCGCTGCCGAGGAAATGGGGGTCACCCGCGCGAATGCCGCGCGCATGCGTA
TGGCCTCGCGCGACCCTGAAGTGCGCAAGATGCTCGGCGGCTTGCCCGGATTCGGCAAGTCGCTCGGCCTCGACGATGAC
TGGGCGTACCGGGCAATCGAGGCGACCGGCAATTATGGCGAAATCTTCGACCGGCACATTACGCCGCTCGGCGTCGAACG
CGGACAGAATAAGCTCTATCGGGACGGCGGGCTGATCTACCCGTTGCCGATGCGATGA

Upstream 100 bases:

>100_bases
CGACTGCGCGGCCTGGGTGACCGATCCCGAGAGCATCACGGCCCTGAAGGCTTCGAGGTGACGCAGGTTCATCGGACATC
GCTCCCTATAGCTATTTCTT

Downstream 100 bases:

>100_bases
CTCATAAACACAGGCGGCTTGCCATCGCTGCGTTGCCCTGGCTGCTGATCGCGGGCGGGCTTGTGGTCGCCTACGGCCTG
TTTGCGACATTGGCGGACAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MALALKASFMNRSHASRRWLPALLAAGALLLGGCGREPAGTGGHEIAAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKR
GRWQGFFVDYCRALAAAVLGDARKVRFMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPR
RSGVRLPTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFTLTVIRLADTAHPD
DYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRANAARMRMASRDPEVRKMLGGLPGFGKSLGLDDD
WAYRAIEATGNYGEIFDRHITPLGVERGQNKLYRDGGLIYPLPMR

Sequences:

>Translated_365_residues
MALALKASFMNRSHASRRWLPALLAAGALLLGGCGREPAGTGGHEIAAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKR
GRWQGFFVDYCRALAAAVLGDARKVRFMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPR
RSGVRLPTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFTLTVIRLADTAHPD
DYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRANAARMRMASRDPEVRKMLGGLPGFGKSLGLDDD
WAYRAIEATGNYGEIFDRHITPLGVERGQNKLYRDGGLIYPLPMR
>Mature_364_residues
ALALKASFMNRSHASRRWLPALLAAGALLLGGCGREPAGTGGHEIAAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRG
RWQGFFVDYCRALAAAVLGDARKVRFMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRR
SGVRLPTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFTLTVIRLADTAHPDD
YVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRANAARMRMASRDPEVRKMLGGLPGFGKSLGLDDDW
AYRAIEATGNYGEIFDRHITPLGVERGQNKLYRDGGLIYPLPMR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=224, Percent_Identity=25, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 40216; Mature: 40084

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALALKASFMNRSHASRRWLPALLAAGALLLGGCGREPAGTGGHEIAAAKGSTLARIRAR
CEEEEEHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCEEEEEEEC
GTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVRFMPVASNKRFTIVQ
CEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE
TGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRLPTDLDGASICITKG
CCCCHHEECCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECC
TTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFTLTVIRLADTAHPD
CCCCCCHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEECCCEEEEEEEEECCCCCC
DYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRANAARMRMASRDPE
CEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
VRKMLGGLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHITPLGVERGQNKLYRDGGLIY
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCHHCCCCCEECCCCEEE
PLPMR
ECCCC
>Mature Secondary Structure 
ALALKASFMNRSHASRRWLPALLAAGALLLGGCGREPAGTGGHEIAAAKGSTLARIRAR
EEEEEHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCEEEEEEEC
GTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVRFMPVASNKRFTIVQ
CEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE
TGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRLPTDLDGASICITKG
CCCCHHEECCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECC
TTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAFTLTVIRLADTAHPD
CCCCCCHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEECCCEEEEEEEEECCCCCC
DYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTRANAARMRMASRDPE
CEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
VRKMLGGLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHITPLGVERGQNKLYRDGGLIY
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCHHCCCCCEECCCCEEE
PLPMR
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]