Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487890

Identifier: 103487890

GI number: 103487890

Start: 2544061

End: 2544765

Strand: Reverse

Name: 103487890

Synonym: Sala_2410

Alternate gene names: NA

Gene position: 2544765-2544061 (Counterclockwise)

Preceding gene: 103487891

Following gene: 103487889

Centisome position: 76.07

GC content: 66.1

Gene sequence:

>705_bases
ATGGCGATCCGTTGGCCGCTGCTCGTCCGGCGAACGCATAAATGGCTGGCCTTGGTGGTCGGCGTCCAGGCGCTGCTCTG
GACGCTGACCGGCTTCTACATGGTGGTCGTGCATATCGACACCATCCATGGCGACCATCTCGTGCGCGCGCCGATGGTTC
AGCCCTTCGACCTCGCGGGCCTCGCGCCGCCGTCGCGGATCGTTGCGGCCGCGCCCGGTGCGTCCGAGGTTCGCTTGCAG
CGGTTCTTCGATCGCCCCGTCTGGCGCGCTGAAACTCCCGAAGGGGCGCGGCTGTTCGATGCCCGCTCGGGTGCGCCGCT
GCCTGCGCTTACCGAGTCCCAGGTCCGCGAGCAGGCGCGGCGCATCTACACCGGCGACGGCAAGATCGTGTCGGTGCGGC
TGTTGACCGAAGCGCCACAGGAAATGCAGTCGCGCAAGCCGCCCTATTGGCAGGTCGAGTTCGAGGGCTGGAACCGCCCG
ACGCTCTATCTGTCGCCGACGACCGGTGAGCTTATCTCGCGCCGCCACGCATTGTGGCGCGTGTTCGACTTCGCGTGGAT
GCTCCACATCATGGACTATGATGAGCGGACCGACGTCAACAACCCGTTGCTCCGCGTCGCGACCTGGAGCGTCTTCGCGA
TGGCGATCAGCGGGGCGTGGTTGCTGATCTGGTCCTTCAAACGCCGCAAGAGGAAGCAGGCATGA

Upstream 100 bases:

>100_bases
TCCAGAGCTTCACCGATGCGAACACCGACACGATGACCTATGACCTGCTCGGACGGCGTTTCTACGTCGGCTTCCGCACC
GCGTTCTGAGGGTAATCGAT

Downstream 100 bases:

>100_bases
AACGCATCCGACTGACGCCGCTCTTCTTCCGGCGCATCCACAAATGGGTCGGGCTGATCCTGGGTCTCCAGTTCCTGCTC
TGGGCGCTCAGCGGATCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAIRWPLLVRRTHKWLALVVGVQALLWTLTGFYMVVVHIDTIHGDHLVRAPMVQPFDLAGLAPPSRIVAAAPGASEVRLQ
RFFDRPVWRAETPEGARLFDARSGAPLPALTESQVREQARRIYTGDGKIVSVRLLTEAPQEMQSRKPPYWQVEFEGWNRP
TLYLSPTTGELISRRHALWRVFDFAWMLHIMDYDERTDVNNPLLRVATWSVFAMAISGAWLLIWSFKRRKRKQA

Sequences:

>Translated_234_residues
MAIRWPLLVRRTHKWLALVVGVQALLWTLTGFYMVVVHIDTIHGDHLVRAPMVQPFDLAGLAPPSRIVAAAPGASEVRLQ
RFFDRPVWRAETPEGARLFDARSGAPLPALTESQVREQARRIYTGDGKIVSVRLLTEAPQEMQSRKPPYWQVEFEGWNRP
TLYLSPTTGELISRRHALWRVFDFAWMLHIMDYDERTDVNNPLLRVATWSVFAMAISGAWLLIWSFKRRKRKQA
>Mature_233_residues
AIRWPLLVRRTHKWLALVVGVQALLWTLTGFYMVVVHIDTIHGDHLVRAPMVQPFDLAGLAPPSRIVAAAPGASEVRLQR
FFDRPVWRAETPEGARLFDARSGAPLPALTESQVREQARRIYTGDGKIVSVRLLTEAPQEMQSRKPPYWQVEFEGWNRPT
LYLSPTTGELISRRHALWRVFDFAWMLHIMDYDERTDVNNPLLRVATWSVFAMAISGAWLLIWSFKRRKRKQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26996; Mature: 26865

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRWPLLVRRTHKWLALVVGVQALLWTLTGFYMVVVHIDTIHGDHLVRAPMVQPFDLAG
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEECCCCCCCCCCC
LAPPSRIVAAAPGASEVRLQRFFDRPVWRAETPEGARLFDARSGAPLPALTESQVREQAR
CCCCHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
RIYTGDGKIVSVRLLTEAPQEMQSRKPPYWQVEFEGWNRPTLYLSPTTGELISRRHALWR
HEECCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHH
VFDFAWMLHIMDYDERTDVNNPLLRVATWSVFAMAISGAWLLIWSFKRRKRKQA
HHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEHHHHHCCCC
>Mature Secondary Structure 
AIRWPLLVRRTHKWLALVVGVQALLWTLTGFYMVVVHIDTIHGDHLVRAPMVQPFDLAG
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEECCCCCCCCCCC
LAPPSRIVAAAPGASEVRLQRFFDRPVWRAETPEGARLFDARSGAPLPALTESQVREQAR
CCCCHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
RIYTGDGKIVSVRLLTEAPQEMQSRKPPYWQVEFEGWNRPTLYLSPTTGELISRRHALWR
HEECCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHH
VFDFAWMLHIMDYDERTDVNNPLLRVATWSVFAMAISGAWLLIWSFKRRKRKQA
HHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA