Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487871

Identifier: 103487871

GI number: 103487871

Start: 2523359

End: 2523784

Strand: Reverse

Name: 103487871

Synonym: Sala_2390

Alternate gene names: NA

Gene position: 2523784-2523359 (Counterclockwise)

Preceding gene: 103487873

Following gene: 103487869

Centisome position: 75.45

GC content: 59.86

Gene sequence:

>426_bases
ATGAACGGCGAGGCGACGCCAGAGGAACTGGAGGATATTCGCGACAAGATCGATTCCTATAGGTTCCGGCAGAATGTTCG
CGCCGCCCTGCGCGGCATCAATGACCCGGAACACATAGGGCAGGTTCAGGACGCGCTACGCAAATTGCAGCGGCGCGCGG
AGAGTCTGGGCGCAAAACGAACAAACCCGCGCGACATGTTCCGGATCGGCGGCATCGGCCTGAGTGTCGGCGTTTTCGGT
TCGGCGCTTGTCGGGGCCTTTTCCATCGCGGCATCGCCCGTGCTGCTGGTCCCGATGGTCGGGGCCGCCTATATCGGTTG
GAGATCGGTTTCCGACAGCAACCACGCTTCGCGCGAAATCGAAATCTTGCGTCAGATTGCCGAAATCGCAAAGGAGCTGG
CCAAGGATGGAGATCGAACGAAATGA

Upstream 100 bases:

>100_bases
ACACAAGAGGGCTCGACGCTTTGCTTCGCAAGGTGATACAGCGATAAAGGCGGCATGAGCGAACACCTCCTCATGCCTCA
TCGCGCAGTTCACCGAAGCC

Downstream 100 bases:

>100_bases
CGGGCCTGTTTTCACATCCCTATGCGATCGAAGGCGTTACGCTGTTGCTGGTCTTGGCCCACCATTTCGCCATTCAGGCG
CGGCGGTATAGAAAGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNGEATPEELEDIRDKIDSYRFRQNVRAALRGINDPEHIGQVQDALRKLQRRAESLGAKRTNPRDMFRIGGIGLSVGVFG
SALVGAFSIAASPVLLVPMVGAAYIGWRSVSDSNHASREIEILRQIAEIAKELAKDGDRTK

Sequences:

>Translated_141_residues
MNGEATPEELEDIRDKIDSYRFRQNVRAALRGINDPEHIGQVQDALRKLQRRAESLGAKRTNPRDMFRIGGIGLSVGVFG
SALVGAFSIAASPVLLVPMVGAAYIGWRSVSDSNHASREIEILRQIAEIAKELAKDGDRTK
>Mature_141_residues
MNGEATPEELEDIRDKIDSYRFRQNVRAALRGINDPEHIGQVQDALRKLQRRAESLGAKRTNPRDMFRIGGIGLSVGVFG
SALVGAFSIAASPVLLVPMVGAAYIGWRSVSDSNHASREIEILRQIAEIAKELAKDGDRTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15471; Mature: 15471

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGEATPEELEDIRDKIDSYRFRQNVRAALRGINDPEHIGQVQDALRKLQRRAESLGAKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TNPRDMFRIGGIGLSVGVFGSALVGAFSIAASPVLLVPMVGAAYIGWRSVSDSNHASREI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EILRQIAEIAKELAKDGDRTK
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNGEATPEELEDIRDKIDSYRFRQNVRAALRGINDPEHIGQVQDALRKLQRRAESLGAKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TNPRDMFRIGGIGLSVGVFGSALVGAFSIAASPVLLVPMVGAAYIGWRSVSDSNHASREI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EILRQIAEIAKELAKDGDRTK
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA