| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487799
Identifier: 103487799
GI number: 103487799
Start: 2446944
End: 2447213
Strand: Direct
Name: 103487799
Synonym: Sala_2318
Alternate gene names: NA
Gene position: 2446944-2447213 (Clockwise)
Preceding gene: 103487798
Following gene: 103487800
Centisome position: 73.15
GC content: 68.52
Gene sequence:
>270_bases GTGCCGTCATGGTCCTCATCTAGAGCCGATTGCCGACCCTTCCCCCGCTTGCTATGGGCGCGAGCGATGACCCAGCCTGC ACCCGCCCCCGAAACCATCCGCACACCCAGGACCCGCATCGCCTGCGACGGCACCGGCGACGGCCTCGCCGATGCGGCGC TCGGCCATCCGCGTGTGTGGCTCGAAATCGACCCCGACGCCGGCTTCGTCGATTGCGGCTATTGCGACCGCCGCTTCGTG CTGATCGGCGGCGTCGCGGATAAGGCATAG
Upstream 100 bases:
>100_bases ATAGCGGCACCTTCACGATTACGCTCAACTATCTTTAGTTCTTCTGTGGGGGGACGACGGCACCGGGGGACCACTGGCAC CCGGAAGGGGGCTTGCACCG
Downstream 100 bases:
>100_bases CCCGGACGAACGGCCTTTGCGTCGGCGGCCCCGCGTCCCTATATCGGTTCGATGACAAGCCCCACCGATCCCCGCCGCTT CCTCTATCGCGCCGACGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPSWSSSRADCRPFPRLLWARAMTQPAPAPETIRTPRTRIACDGTGDGLADAALGHPRVWLEIDPDAGFVDCGYCDRRFV LIGGVADKA
Sequences:
>Translated_89_residues MPSWSSSRADCRPFPRLLWARAMTQPAPAPETIRTPRTRIACDGTGDGLADAALGHPRVWLEIDPDAGFVDCGYCDRRFV LIGGVADKA >Mature_88_residues PSWSSSRADCRPFPRLLWARAMTQPAPAPETIRTPRTRIACDGTGDGLADAALGHPRVWLEIDPDAGFVDCGYCDRRFVL IGGVADKA
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9671; Mature: 9540
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWSSSRADCRPFPRLLWARAMTQPAPAPETIRTPRTRIACDGTGDGLADAALGHPRVW CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE LEIDPDAGFVDCGYCDRRFVLIGGVADKA EEECCCCCEEECCCCCCEEEEEECCCCCC >Mature Secondary Structure PSWSSSRADCRPFPRLLWARAMTQPAPAPETIRTPRTRIACDGTGDGLADAALGHPRVW CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE LEIDPDAGFVDCGYCDRRFVLIGGVADKA EEECCCCCEEECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA