Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487782

Identifier: 103487782

GI number: 103487782

Start: 2428332

End: 2428943

Strand: Direct

Name: 103487782

Synonym: Sala_2301

Alternate gene names: NA

Gene position: 2428332-2428943 (Clockwise)

Preceding gene: 103487781

Following gene: 103487788

Centisome position: 72.59

GC content: 52.61

Gene sequence:

>612_bases
ATGAGGATCGTTCAATACTATTCTCATCTTAACGGCTTCGAGTTCCTCAAGTATCACAAAGCCCACATCTGGGATGATCT
CGAAGCCGTCGTAGCTGCTGTCGATGCCGAAGCCTGTCGGACCAAGGCGTCAGCGGAGGCTCGGAAAGAAGGGCGTCTGC
TATACTCCCCAGTGGATATGAACAAAGAGTTCGCGCGCCTATTTGCGGACCATCATTGGACCGAGCGACGGGTTACAAAC
TGGCTGTCAGAGGACACCTCGCTATTGCGGGATATAATGTCCCTTGAACCGCAGGCGCAGAAGGAAATGATTGAGGCGCG
AGGCCTTGAGCCGATTATGACCTACAATCAAACCGATTTCGTGAAGGATAGGGTAGCGGTCGAAATACAGTTCGGCAAAT
ATGCGTTTGTCGCGCATGACCTGTTCGTTAAACATATGTCATTCTTCATTAGCGATGACATAGACGTCGGTATCGAGGTC
GTGCCCATGAAGTCGATGGAACGCGAAATGTCTTCTGGGGTTCCCTACTACGAGCGGGACCTATTCAATCTCATGCGGCA
GGGACGTGGCATTCCCGCGGTACCGATCATCTTGGTCGGCGTCGCGCCCTGA

Upstream 100 bases:

>100_bases
TTGCATGGCACCGGGTTCACGCATTGCGCGCTGGAACTTTGAAAACTCGACCAATGAACAAGCCGGTTTATGATCCTAGC
TTGCCGAAGGGCGGGCACTA

Downstream 100 bases:

>100_bases
CCGCCGACCAGTCGCCATAGCCGCGAACGTCGCCTTCTTGTTAATCTACGCCCAAAAAATTTTCTGGCCGCCGACAGCTG
CTAGGCAGCGGCTATTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MRIVQYYSHLNGFEFLKYHKAHIWDDLEAVVAAVDAEACRTKASAEARKEGRLLYSPVDMNKEFARLFADHHWTERRVTN
WLSEDTSLLRDIMSLEPQAQKEMIEARGLEPIMTYNQTDFVKDRVAVEIQFGKYAFVAHDLFVKHMSFFISDDIDVGIEV
VPMKSMEREMSSGVPYYERDLFNLMRQGRGIPAVPIILVGVAP

Sequences:

>Translated_203_residues
MRIVQYYSHLNGFEFLKYHKAHIWDDLEAVVAAVDAEACRTKASAEARKEGRLLYSPVDMNKEFARLFADHHWTERRVTN
WLSEDTSLLRDIMSLEPQAQKEMIEARGLEPIMTYNQTDFVKDRVAVEIQFGKYAFVAHDLFVKHMSFFISDDIDVGIEV
VPMKSMEREMSSGVPYYERDLFNLMRQGRGIPAVPIILVGVAP
>Mature_203_residues
MRIVQYYSHLNGFEFLKYHKAHIWDDLEAVVAAVDAEACRTKASAEARKEGRLLYSPVDMNKEFARLFADHHWTERRVTN
WLSEDTSLLRDIMSLEPQAQKEMIEARGLEPIMTYNQTDFVKDRVAVEIQFGKYAFVAHDLFVKHMSFFISDDIDVGIEV
VPMKSMEREMSSGVPYYERDLFNLMRQGRGIPAVPIILVGVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23464; Mature: 23464

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVQYYSHLNGFEFLKYHKAHIWDDLEAVVAAVDAEACRTKASAEARKEGRLLYSPVDM
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
NKEFARLFADHHWTERRVTNWLSEDTSLLRDIMSLEPQAQKEMIEARGLEPIMTYNQTDF
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCHHH
VKDRVAVEIQFGKYAFVAHDLFVKHMSFFISDDIDVGIEVVPMKSMEREMSSGVPYYERD
HHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHHH
LFNLMRQGRGIPAVPIILVGVAP
HHHHHHCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MRIVQYYSHLNGFEFLKYHKAHIWDDLEAVVAAVDAEACRTKASAEARKEGRLLYSPVDM
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
NKEFARLFADHHWTERRVTNWLSEDTSLLRDIMSLEPQAQKEMIEARGLEPIMTYNQTDF
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCHHH
VKDRVAVEIQFGKYAFVAHDLFVKHMSFFISDDIDVGIEVVPMKSMEREMSSGVPYYERD
HHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHHH
LFNLMRQGRGIPAVPIILVGVAP
HHHHHHCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA