Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487775

Identifier: 103487775

GI number: 103487775

Start: 2419052

End: 2419507

Strand: Reverse

Name: 103487775

Synonym: Sala_2294

Alternate gene names: NA

Gene position: 2419507-2419052 (Counterclockwise)

Preceding gene: 103487779

Following gene: 103487774

Centisome position: 72.33

GC content: 66.67

Gene sequence:

>456_bases
ATGCGTATCATTCTGACCGCCCTCGCCCTGTCGCTTGCGTTGCCGATGGCGGCGTGCAGCCACGATGCGAGCGAGGCGGA
GCATGCGGCGACGACCGTGGTGACGATCACCATGGCGGGCAAGGCGCACCGGTTCGATGTCGAGGTCGCGCGCAGCGATG
CGGAGCAGAAACAGGGGCTGAAGTTCCGCACCGGCCTGCCGGCGAACGGCGGGATGCTCTTTCCGTTCGAAAAACCGCGG
ATCGCGAGTTTCTGGATGCAGGACACGCTGATCCCGCTCGACATGATCTTCATCCGCGCCGACGGCAGCATCGACCGTAT
CGCCGAAAACACCATCCCCGGCTCGCTCGAACCCGTCGCGAGCGGCGGCGAGGTGAGCGCGGTGCTCGAACTTGCGGGCG
GCACCGCGGCGCGGCTGGGGATCGACGAGAGCGCCAGCGTGACGTGGACACAATAG

Upstream 100 bases:

>100_bases
CGGCGCTGGACGCGGGGGCGGCGCTCGATTAGCTCCTATACTCCGCATCGGGCCGTCATCCCGGCCTTCGCGGGATGACG
AATATAGGCTGGAGTCCTTT

Downstream 100 bases:

>100_bases
GCGGCAATTCGGCGAGCAATTCGCTTGCGAAGGCCGCACCCTTGCCTGTAAACGCCGCAGCCATGAGCATCCTGGGCAAG
ATTTTCACCTGGTGGGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRIILTALALSLALPMAACSHDASEAEHAATTVVTITMAGKAHRFDVEVARSDAEQKQGLKFRTGLPANGGMLFPFEKPR
IASFWMQDTLIPLDMIFIRADGSIDRIAENTIPGSLEPVASGGEVSAVLELAGGTAARLGIDESASVTWTQ

Sequences:

>Translated_151_residues
MRIILTALALSLALPMAACSHDASEAEHAATTVVTITMAGKAHRFDVEVARSDAEQKQGLKFRTGLPANGGMLFPFEKPR
IASFWMQDTLIPLDMIFIRADGSIDRIAENTIPGSLEPVASGGEVSAVLELAGGTAARLGIDESASVTWTQ
>Mature_151_residues
MRIILTALALSLALPMAACSHDASEAEHAATTVVTITMAGKAHRFDVEVARSDAEQKQGLKFRTGLPANGGMLFPFEKPR
IASFWMQDTLIPLDMIFIRADGSIDRIAENTIPGSLEPVASGGEVSAVLELAGGTAARLGIDESASVTWTQ

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15981; Mature: 15981

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIILTALALSLALPMAACSHDASEAEHAATTVVTITMAGKAHRFDVEVARSDAEQKQGL
CEEHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEEEEECCCCEEEEHHHHHCCHHHHCCC
KFRTGLPANGGMLFPFEKPRIASFWMQDTLIPLDMIFIRADGSIDRIAENTIPGSLEPVA
EEECCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCC
SGGEVSAVLELAGGTAARLGIDESASVTWTQ
CCCCEEEEEEECCCCEEEECCCCCCCEEECC
>Mature Secondary Structure
MRIILTALALSLALPMAACSHDASEAEHAATTVVTITMAGKAHRFDVEVARSDAEQKQGL
CEEHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEEEEECCCCEEEEHHHHHCCHHHHCCC
KFRTGLPANGGMLFPFEKPRIASFWMQDTLIPLDMIFIRADGSIDRIAENTIPGSLEPVA
EEECCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCC
SGGEVSAVLELAGGTAARLGIDESASVTWTQ
CCCCEEEEEEECCCCEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA