| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is catD [H]
Identifier: 103487703
GI number: 103487703
Start: 2333868
End: 2334773
Strand: Reverse
Name: catD [H]
Synonym: Sala_2222
Alternate gene names: 103487703
Gene position: 2334773-2333868 (Counterclockwise)
Preceding gene: 103487704
Following gene: 103487699
Centisome position: 69.8
GC content: 68.32
Gene sequence:
>906_bases ATGCAGACCGAACAGGCGGCCGTGAACGGCATCGACATCACCTATGAGGATCGCGGGCCGAAGGACGCGCCCGCCATCCT GTTGGTGATGGGGCTGGGCGGACAGTTGACGCTGTGGCCCGACGAGTTCGTCGCGGCGTTGAACGACCGGGGGTTCCGCA CGATCCGCTATGACAATCGCGACGTCGGTCTGTCGACGCGCTTCGACGCGGCAGGGGTGCCGAACCTCAAATGGATGTTC GTCAAGGCGGCGATCGGCCTGCCGGTGCGCCCCGCCTATACGCTCGCCGACATGGCCGCCGACGGCCTCGGCCTGCTCGA CCATCTGGGCATCGGACGGGCCCATATCGTCGGGGTGTCGATGGGGGGCATGATTTCGCAGCATATCGCCGCGCGCTATC CGGACCGCGTGCTTTCGCTCACCTCGATCATGTCGACGACGGGCAACCGCCGCCTGCCGAAAGCGCGCAAGGAAGCGATG CAGGCGCTCGCCAACCGCCCGATGAGCGGCGACAAGGAGGCGCTGATTGCCTATGGGGTGAAGGCGGCGCGGGTGATCGG CAGCCCCGGCTATCCGTCCGACGAGGAGCGGCTTCAGCGCCGCGTCCGCGCCGATTTCGAGCGCGGCTGGTATCCGCCGG GCTTTGCGCGGCAGATGGCGGCGATCATCGCCGATGGCGACCGGCGGCCGATGCTGAAGTCGATCAAGGCGCCGACGCTG GTGATTCACGGCGAGGACGATCCGCTGGTGCCGCTCGCGGGAGGGCGCGACACGGCGGCCCATATCGCGGGCGCGCGGCT GCTGACGATCCCCGGCATGGGGCATGACCTGCCGCTGGCGCTTGTCGATACGCTCGCCGATGCGATCGCGGGACATATTG GGGAGGAGGTTGCCGTCGCTGCCTGA
Upstream 100 bases:
>100_bases CTGACCCTAGGCTTGCCTAAACGCAAAAGCGGGGGCAGGTTGGGCTTGTGAACAATCATGTCAGCGCCGATTGCCGGTGC GACCTGGCCAGGGAAATTGC
Downstream 100 bases:
>100_bases TCTCGCCTCCCATTTATGGGAGGGGTCGGGGGAGGACATGTCGCTCGGGGAGAGCTGCCTGAACAGGCCCTCCCCTAACC CCTCCCGCAAGCGGGGGGAT
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MQTEQAAVNGIDITYEDRGPKDAPAILLVMGLGGQLTLWPDEFVAALNDRGFRTIRYDNRDVGLSTRFDAAGVPNLKWMF VKAAIGLPVRPAYTLADMAADGLGLLDHLGIGRAHIVGVSMGGMISQHIAARYPDRVLSLTSIMSTTGNRRLPKARKEAM QALANRPMSGDKEALIAYGVKAARVIGSPGYPSDEERLQRRVRADFERGWYPPGFARQMAAIIADGDRRPMLKSIKAPTL VIHGEDDPLVPLAGGRDTAAHIAGARLLTIPGMGHDLPLALVDTLADAIAGHIGEEVAVAA
Sequences:
>Translated_301_residues MQTEQAAVNGIDITYEDRGPKDAPAILLVMGLGGQLTLWPDEFVAALNDRGFRTIRYDNRDVGLSTRFDAAGVPNLKWMF VKAAIGLPVRPAYTLADMAADGLGLLDHLGIGRAHIVGVSMGGMISQHIAARYPDRVLSLTSIMSTTGNRRLPKARKEAM QALANRPMSGDKEALIAYGVKAARVIGSPGYPSDEERLQRRVRADFERGWYPPGFARQMAAIIADGDRRPMLKSIKAPTL VIHGEDDPLVPLAGGRDTAAHIAGARLLTIPGMGHDLPLALVDTLADAIAGHIGEEVAVAA >Mature_301_residues MQTEQAAVNGIDITYEDRGPKDAPAILLVMGLGGQLTLWPDEFVAALNDRGFRTIRYDNRDVGLSTRFDAAGVPNLKWMF VKAAIGLPVRPAYTLADMAADGLGLLDHLGIGRAHIVGVSMGGMISQHIAARYPDRVLSLTSIMSTTGNRRLPKARKEAM QALANRPMSGDKEALIAYGVKAARVIGSPGYPSDEERLQRRVRADFERGWYPPGFARQMAAIIADGDRRPMLKSIKAPTL VIHGEDDPLVPLAGGRDTAAHIAGARLLTIPGMGHDLPLALVDTLADAIAGHIGEEVAVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 32199; Mature: 32199
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTEQAAVNGIDITYEDRGPKDAPAILLVMGLGGQLTLWPDEFVAALNDRGFRTIRYDNR CCCCHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEECHHHHHHHHCCCCCEEEEECCC DVGLSTRFDAAGVPNLKWMFVKAAIGLPVRPAYTLADMAADGLGLLDHLGIGRAHIVGVS CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEEEE MGGMISQHIAARYPDRVLSLTSIMSTTGNRRLPKARKEAMQALANRPMSGDKEALIAYGV HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCH KAARVIGSPGYPSDEERLQRRVRADFERGWYPPGFARQMAAIIADGDRRPMLKSIKAPTL HHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEE VIHGEDDPLVPLAGGRDTAAHIAGARLLTIPGMGHDLPLALVDTLADAIAGHIGEEVAVA EEECCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEC A C >Mature Secondary Structure MQTEQAAVNGIDITYEDRGPKDAPAILLVMGLGGQLTLWPDEFVAALNDRGFRTIRYDNR CCCCHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEECHHHHHHHHCCCCCEEEEECCC DVGLSTRFDAAGVPNLKWMFVKAAIGLPVRPAYTLADMAADGLGLLDHLGIGRAHIVGVS CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEEEE MGGMISQHIAARYPDRVLSLTSIMSTTGNRRLPKARKEAMQALANRPMSGDKEALIAYGV HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCH KAARVIGSPGYPSDEERLQRRVRADFERGWYPPGFARQMAAIIADGDRRPMLKSIKAPTL HHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEE VIHGEDDPLVPLAGGRDTAAHIAGARLLTIPGMGHDLPLALVDTLADAIAGHIGEEVAVA EEECCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]