| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487698
Identifier: 103487698
GI number: 103487698
Start: 2328228
End: 2328794
Strand: Reverse
Name: 103487698
Synonym: Sala_2217
Alternate gene names: NA
Gene position: 2328794-2328228 (Counterclockwise)
Preceding gene: 103487699
Following gene: 103487695
Centisome position: 69.62
GC content: 69.14
Gene sequence:
>567_bases TTGACCGCGCGCGCCCGCTTGGGCACATCGCGGCGCATGTCGACCATCGCCCCCGTGATCGAAACCGCCCGCCTGCGCCT GCGCCCCGGTCGCCTTGCCGACAAGGATACGCATATCGCGATGTGGGCCGACGCCCGCGTCACGCGCTTTATCGGCGGCG AACCGCGCGCGCCCGATGTCAGCTGGGGCAAGTTTTTAAGCTCGGCGGGGCTGTGGCCGGTGATGGGTTTCGGTTACTGG GTATTCGCCGACCGCGCGAGCGACGCGCTGATCGGCATGGGCGGGCTCAGCTATTTCTGCCGCGGCATAGCCGAACTCGA AGGCGTGCCCGAAGCGGGCTGGGCGTTCGATGCCGACCATTGGGGCGCGGGCTATGCGACCGAGGCGATGACCGCCGTGC TCGGCTGGGCCGACGCGAACCTCGACGCAAAGCATGTGCGCTGCATCATCGACCGCGGCCATGCAGCGTCCGAGCGGGTT GCGGCGAAGCTGGGGTTCCGGCACATCGGCGACACCGACGCGCTGGGGCATGTGACGGCGATTTATTCGCGGCCGCGGGG CGGCTGA
Upstream 100 bases:
>100_bases TGCTCACGCGCGTCGATACGCTGGCGGTGATGCGCGTCAGGCAGCAGGTCGATGGCAAGGCGGTGCTGCACGACCTGTTC GACCATTATCTGAACCCCGA
Downstream 100 bases:
>100_bases TCGCCATCTATCATCGTCATCCCGGCGAAGGCCGGGATCTCATCGTCTCGTCCTGACGCACGAGAGATGTTACGCCAGCT CGACCACCAGCACCCCGCCG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase Protein; GNAT Family Acetyltransferase; Ribosomal-Protein-Alanine Acetyltransferase; Acetyltransferase GNAT Family; Acetyl Transferase; GNAT Family xin-Antitoxin System Toxin Component; GnaT-Family Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTARARLGTSRRMSTIAPVIETARLRLRPGRLADKDTHIAMWADARVTRFIGGEPRAPDVSWGKFLSSAGLWPVMGFGYW VFADRASDALIGMGGLSYFCRGIAELEGVPEAGWAFDADHWGAGYATEAMTAVLGWADANLDAKHVRCIIDRGHAASERV AAKLGFRHIGDTDALGHVTAIYSRPRGG
Sequences:
>Translated_188_residues MTARARLGTSRRMSTIAPVIETARLRLRPGRLADKDTHIAMWADARVTRFIGGEPRAPDVSWGKFLSSAGLWPVMGFGYW VFADRASDALIGMGGLSYFCRGIAELEGVPEAGWAFDADHWGAGYATEAMTAVLGWADANLDAKHVRCIIDRGHAASERV AAKLGFRHIGDTDALGHVTAIYSRPRGG >Mature_187_residues TARARLGTSRRMSTIAPVIETARLRLRPGRLADKDTHIAMWADARVTRFIGGEPRAPDVSWGKFLSSAGLWPVMGFGYWV FADRASDALIGMGGLSYFCRGIAELEGVPEAGWAFDADHWGAGYATEAMTAVLGWADANLDAKHVRCIIDRGHAASERVA AKLGFRHIGDTDALGHVTAIYSRPRGG
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20328; Mature: 20197
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARARLGTSRRMSTIAPVIETARLRLRPGRLADKDTHIAMWADARVTRFIGGEPRAPDV CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCC SWGKFLSSAGLWPVMGFGYWVFADRASDALIGMGGLSYFCRGIAELEGVPEAGWAFDADH HHHHHHHHCCCCHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHHHCCCCCCCCEECCCC WGAGYATEAMTAVLGWADANLDAKHVRCIIDRGHAASERVAAKLGFRHIGDTDALGHVTA CCCCHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH IYSRPRGG EECCCCCC >Mature Secondary Structure TARARLGTSRRMSTIAPVIETARLRLRPGRLADKDTHIAMWADARVTRFIGGEPRAPDV CCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCC SWGKFLSSAGLWPVMGFGYWVFADRASDALIGMGGLSYFCRGIAELEGVPEAGWAFDADH HHHHHHHHCCCCHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHHHCCCCCCCCEECCCC WGAGYATEAMTAVLGWADANLDAKHVRCIIDRGHAASERVAAKLGFRHIGDTDALGHVTA CCCCHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH IYSRPRGG EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA