Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487686

Identifier: 103487686

GI number: 103487686

Start: 2317572

End: 2318333

Strand: Reverse

Name: 103487686

Synonym: Sala_2205

Alternate gene names: NA

Gene position: 2318333-2317572 (Counterclockwise)

Preceding gene: 103487687

Following gene: 103487685

Centisome position: 69.3

GC content: 68.37

Gene sequence:

>762_bases
TTGGCCCTGAGCCCGACGAACGACGCCGCGCTGTTGCAGGAAGTCGACGAAGCCGTCCGCAAGGACCGGCTCGACACGAT
CATGCAGCGCTATGGCCGCTGGATCATCGGCGGCGTGCTGGCGATCCTGCTGGCCTTTGGCGGCTATCTTTACTGGAACC
ACCGGCAGGATGTCGCGCGCGGCGAACAGGCGGAGGAGCTGATCGCGGCGCTGGACAAGCTCGAGGCCAACCAGCCGCGC
GCCGCGACGAGCGAGCTGGAGAAGATCGCGGCCGCGGGCACCCCGGCCTATCGCGCCGCGGCGACGATGCAGCTGGCGAA
TGTCAAGGCGGGCGCGGGCGACCTCAAAGCCGCCGCCGCGCTGATGGCGAAGGTCGCCGCCGATACGCAAGTCGACCGGT
CGCTCCGCGACCTGGCGCTCATTCGCCAGACGGCGTTCGAATATGACACGCTGAAGCCCGAGGCGGTGATCGCGCGGATG
AAACCGATCGTTGACGCCAGGGATCCGGCGTCGAGCTGGTTCGCCAGCGCCGCCGAGCTGTCGGCGAGTGCCCACTACCG
GCTTGGCCAGTTCGACCGGGCGGGTGCGCTCTATGGCCGGATCGCCAAATTGCCCGACCTTCCCAAATCGCTGCAATCGC
GCTCGGTCCAGATGGCGGGGATGCTGGGCGTCGATGCCGTCGCCGACCGCGCCGCCGAAAGCGCCGCGGCCGAGCAAAAG
GGAGCGGCGCCTGCCGCCCAGAAGACTGAGGAAACCAAATAA

Upstream 100 bases:

>100_bases
CGGCCCGCGCGTCCGACAAGTGAAACGCTTGGCCTTTCCTCGTGTCATCGTTAAGGAAGCGGGCCGGCCTCGCGCCGTTA
CCCAGTTTACGGAGGTTTGA

Downstream 100 bases:

>100_bases
TATGCGGACTGCGCGTTTCGGACTTTATGCGGCGCTGCTGGCGCTGCCGCTGGCGGGTTGCGGCGTGTTCAAGGGCGACG
GCGGCCCCAGGACGCCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MALSPTNDAALLQEVDEAVRKDRLDTIMQRYGRWIIGGVLAILLAFGGYLYWNHRQDVARGEQAEELIAALDKLEANQPR
AATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAALMAKVAADTQVDRSLRDLALIRQTAFEYDTLKPEAVIARM
KPIVDARDPASSWFASAAELSASAHYRLGQFDRAGALYGRIAKLPDLPKSLQSRSVQMAGMLGVDAVADRAAESAAAEQK
GAAPAAQKTEETK

Sequences:

>Translated_253_residues
MALSPTNDAALLQEVDEAVRKDRLDTIMQRYGRWIIGGVLAILLAFGGYLYWNHRQDVARGEQAEELIAALDKLEANQPR
AATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAALMAKVAADTQVDRSLRDLALIRQTAFEYDTLKPEAVIARM
KPIVDARDPASSWFASAAELSASAHYRLGQFDRAGALYGRIAKLPDLPKSLQSRSVQMAGMLGVDAVADRAAESAAAEQK
GAAPAAQKTEETK
>Mature_252_residues
ALSPTNDAALLQEVDEAVRKDRLDTIMQRYGRWIIGGVLAILLAFGGYLYWNHRQDVARGEQAEELIAALDKLEANQPRA
ATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAALMAKVAADTQVDRSLRDLALIRQTAFEYDTLKPEAVIARMK
PIVDARDPASSWFASAAELSASAHYRLGQFDRAGALYGRIAKLPDLPKSLQSRSVQMAGMLGVDAVADRAAESAAAEQKG
AAPAAQKTEETK

Specific function: Unknown

COG id: COG4649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27023; Mature: 26892

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSPTNDAALLQEVDEAVRKDRLDTIMQRYGRWIIGGVLAILLAFGGYLYWNHRQDVAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHC
GEQAEELIAALDKLEANQPRAATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LMAKVAADTQVDRSLRDLALIRQTAFEYDTLKPEAVIARMKPIVDARDPASSWFASAAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SASAHYRLGQFDRAGALYGRIAKLPDLPKSLQSRSVQMAGMLGVDAVADRAAESAAAEQK
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAPAAQKTEETK
CCCCCHHHCCCCC
>Mature Secondary Structure 
ALSPTNDAALLQEVDEAVRKDRLDTIMQRYGRWIIGGVLAILLAFGGYLYWNHRQDVAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHC
GEQAEELIAALDKLEANQPRAATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LMAKVAADTQVDRSLRDLALIRQTAFEYDTLKPEAVIARMKPIVDARDPASSWFASAAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SASAHYRLGQFDRAGALYGRIAKLPDLPKSLQSRSVQMAGMLGVDAVADRAAESAAAEQK
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAPAAQKTEETK
CCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA