Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487587

Identifier: 103487587

GI number: 103487587

Start: 2212828

End: 2213289

Strand: Reverse

Name: 103487587

Synonym: Sala_2106

Alternate gene names: NA

Gene position: 2213289-2212828 (Counterclockwise)

Preceding gene: 103487591

Following gene: 103487580

Centisome position: 66.16

GC content: 68.18

Gene sequence:

>462_bases
ATGGCCCGCCGCCCCGCTTGTCGAGAATGCTTCACCCGATTCGCCGCGGCTTTCGCGCTCTCATGCGTCATGCCCGTGAC
GGCGGGTGCGCAGATGCAGGGGCCGCCCGCACCGCCGCCGCCGCGCGACGCCGAAAGCGCGGTCGCGAATGCGAAGGAAC
TGGTCGATCCCATCCGGCGCTGCAAACCTACCGAGGACGGAACGATCAACGTCTGCGGCACCGACACCGAGCGCCACCGC
CTGACCCCCGAACTGCGCGCGATCGCGCAGGAAGGTCGCGAGGCGCCGCCGAAGCTGCCGCGCGCCGAAGCGCGGGCGAT
GAGCCTCGACAAGCTGCCCTATAACTGGATATCGATCGGCGGCCGCATGAAACCCGGCCCCGAATATAATGCGCTTTATG
AGATGGCAAAGGAGCGCACCGACCCCGAAACGGGAACGCCGCCGCCCCTGGAAGAGCCCTAG

Upstream 100 bases:

>100_bases
TCTCGAGCACGAGCACCCGGTCGAGGTTGCTGCCGCTGTTCGTCATCTCCACCACTCTCCGTCTTTACTTGCTGCGCCCG
TTCGGCATGGTGGGCGCCAT

Downstream 100 bases:

>100_bases
CAGGCTGCGGAAAAGCGGGTGCGTTCGGCCTTTTCTCCAACGGACCGAGGCTTAGACGCGTTTCGGCGAGGGGTTTGAGG
CGGTCTTTTCGGCCATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MARRPACRECFTRFAAAFALSCVMPVTAGAQMQGPPAPPPPRDAESAVANAKELVDPIRRCKPTEDGTINVCGTDTERHR
LTPELRAIAQEGREAPPKLPRAEARAMSLDKLPYNWISIGGRMKPGPEYNALYEMAKERTDPETGTPPPLEEP

Sequences:

>Translated_153_residues
MARRPACRECFTRFAAAFALSCVMPVTAGAQMQGPPAPPPPRDAESAVANAKELVDPIRRCKPTEDGTINVCGTDTERHR
LTPELRAIAQEGREAPPKLPRAEARAMSLDKLPYNWISIGGRMKPGPEYNALYEMAKERTDPETGTPPPLEEP
>Mature_152_residues
ARRPACRECFTRFAAAFALSCVMPVTAGAQMQGPPAPPPPRDAESAVANAKELVDPIRRCKPTEDGTINVCGTDTERHRL
TPELRAIAQEGREAPPKLPRAEARAMSLDKLPYNWISIGGRMKPGPEYNALYEMAKERTDPETGTPPPLEEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16737; Mature: 16606

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPACRECFTRFAAAFALSCVMPVTAGAQMQGPPAPPPPRDAESAVANAKELVDPIRR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CKPTEDGTINVCGTDTERHRLTPELRAIAQEGREAPPKLPRAEARAMSLDKLPYNWISIG
CCCCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCC
GRMKPGPEYNALYEMAKERTDPETGTPPPLEEP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRPACRECFTRFAAAFALSCVMPVTAGAQMQGPPAPPPPRDAESAVANAKELVDPIRR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CKPTEDGTINVCGTDTERHRLTPELRAIAQEGREAPPKLPRAEARAMSLDKLPYNWISIG
CCCCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCC
GRMKPGPEYNALYEMAKERTDPETGTPPPLEEP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA