Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487486

Identifier: 103487486

GI number: 103487486

Start: 2112334

End: 2112975

Strand: Reverse

Name: 103487486

Synonym: Sala_2003

Alternate gene names: NA

Gene position: 2112975-2112334 (Counterclockwise)

Preceding gene: 103487487

Following gene: 103487485

Centisome position: 63.16

GC content: 49.38

Gene sequence:

>642_bases
ATGTTCCGTTATATGGCAGACCAGCTACCTCTGATTCGCGCCGTTGCGTTTTTCGACGGACAAAATCTTTTCCACTCTGC
GAAGCAAGCGTTTGGATACAGCTGGCCCAATTTTGATCCAACCCTATTGGCAGAACGAGTTTGCCAAGACCATGGTTGGC
AGTTGCAGCAAACACGCTTTTATACCGGCGTTCCGGATGCGGCAGACAAGCCGTTCTGGAATCATTTTTGGGTTGCAAAA
GCTGCTCAAATGGCTCGCCAAGGCGTCCATGTTTTTACTCGTTCCTTACGCTATCGGAACAAAAAAGTCAGACTGCCTGA
TGGTACAGAACACTCATTTCTAGACGGAGATGAGAAGGGGATAGATGTTCGTATCGCGCTAGATGTCATCAGGCTTGCCT
TGAAACGAGAGTTTGACGTGGCGATCCTGTTTTGTCGTGATCAAGATCTTACCGAAGTGGCCGACGAAATTCGGCTGATA
GCACAAGAACAAAAACGTTGGATCAAGGTAGCCTCCGCCTTTCCGGTAAGCCCGACATATCGCGTAAGAGGCATCGACAA
GACAGATTGGATCAAGCTCGACCGGCAGCTTTACGACCAATGTCTGGATAGCCGCGACTATCGTCCAAAGAAGCCTGCCT
AA

Upstream 100 bases:

>100_bases
GTCTTATCTGACGGTCATCAACTTCTTCCCCGCCGGACACGCCGAAAGGCCTCCGGCGGGGTTATTAATTTTGGCCTAGC
GAAACTGTTATGTTCATGAC

Downstream 100 bases:

>100_bases
ATAGGAGATCATCATGAACTGGTTTGGCCGGAAGGCTGCGCAGGGGGCTGCGCGGCCCGCTTTGTCGCGGGTGTATGGGA
GCTGGTCGGCGCCTGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFRYMADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGVPDAADKPFWNHFWVAK
AAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVRIALDVIRLALKREFDVAILFCRDQDLTEVADEIRLI
AQEQKRWIKVASAFPVSPTYRVRGIDKTDWIKLDRQLYDQCLDSRDYRPKKPA

Sequences:

>Translated_213_residues
MFRYMADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGVPDAADKPFWNHFWVAK
AAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVRIALDVIRLALKREFDVAILFCRDQDLTEVADEIRLI
AQEQKRWIKVASAFPVSPTYRVRGIDKTDWIKLDRQLYDQCLDSRDYRPKKPA
>Mature_213_residues
MFRYMADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGVPDAADKPFWNHFWVAK
AAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVRIALDVIRLALKREFDVAILFCRDQDLTEVADEIRLI
AQEQKRWIKVASAFPVSPTYRVRGIDKTDWIKLDRQLYDQCLDSRDYRPKKPA

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24969; Mature: 24969

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRYMADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRF
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCEE
YTGVPDAADKPFWNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
IDVRIALDVIRLALKREFDVAILFCRDQDLTEVADEIRLIAQEQKRWIKVASAFPVSPTY
EEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
RVRGIDKTDWIKLDRQLYDQCLDSRDYRPKKPA
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFRYMADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRF
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCEE
YTGVPDAADKPFWNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
IDVRIALDVIRLALKREFDVAILFCRDQDLTEVADEIRLIAQEQKRWIKVASAFPVSPTY
EEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
RVRGIDKTDWIKLDRQLYDQCLDSRDYRPKKPA
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA