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The map label for this gene is psd [H]

Identifier: 103487447

GI number: 103487447

Start: 2068645

End: 2069433

Strand: Reverse

Name: psd [H]

Synonym: Sala_1963

Alternate gene names: 103487447

Gene position: 2069433-2068645 (Counterclockwise)

Preceding gene: 103487450

Following gene: 103487446

Centisome position: 61.86

GC content: 64.51

Gene sequence:

>789_bases
ATGTCGGCGCCTTATCCATTGTCACTGGGGACGCTGATCCCTAGAAGAACGGCCATGTCGAACATCATATCCTCGAACCG
GCCCGGCAGCGGCATCAAGTGGCAATGGCCATCGATCCATCCCGAGGGCCGCAAGTTCCTGTTGATCGCCGGAATTGTGA
CGCTCTGCTTCTGGCTGCTGGGATGGGAAATCCTCGGCTGGCTGATGCTCGGCGTGACCCTGTGGGTCGGTGCTTTTTTC
CGCGATCCGGTGCGTGTGACCCCCGCGAGCGACGACATGATCATCGCCCCTGCCGACGGACTGATCACCCAGATCGCCGA
AGTCCCGCCGCCACCCGAGATCGCCGGGCCCGACGGACTGGGCGATGCGCCGATGTTGCGGGTGTCGATTTTCATGAGTG
TCTTTGACGTCCACATTAACCGCACCCCGGTTGCGGGCACGCTGCGCAAGCTGGTTTATATCCCCGGCAAGTTCGTCAAT
GCCGACCTCGACAAGGCGAGCGAGGAGAATGAGCGCCAGCATTTCGTTGTCGAGCGCGCCGACGGGGTGCGTATCGGCTT
TACCCAGATCGCGGGGCTCGTCGCGCGGCGGATCATGCCCTTCGTGTCGATGGGCAGCGAACTGGCGACCGGGCAGCGCG
TCGGCCTCATCCGCTTCGGCAGTCGCGTCGACGTCTATCTGCCCGCGGGCACCACGCCGAAGGTGCTGCTCGGCCAGCGC
ACGCTGGCGGGCGAGACGGTGATCGCGCGGATCGGGCAGGCGGCGACCATCGACGGCATCGGACAGTAG

Upstream 100 bases:

>100_bases
GCCTTTATCCTTGGGGAGTCGGAGTTGCAGCGGGCCTTAGGCAAAGCGGGGCGATTGATCAACCGCCCCGACGCAACCGG
TGTCGCGCGCGCACGCAACG

Downstream 100 bases:

>100_bases
AGTGGCGGACGAGCATCCGCTCCCCGCCGACGCTGCCGGACGCCGGATCGGCGGTATCGGCCTGCGCGCATTCGCCCCCA
ATGCGATTACCGTGCTCGCG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSAPYPLSLGTLIPRRTAMSNIISSNRPGSGIKWQWPSIHPEGRKFLLIAGIVTLCFWLLGWEILGWLMLGVTLWVGAFF
RDPVRVTPASDDMIIAPADGLITQIAEVPPPPEIAGPDGLGDAPMLRVSIFMSVFDVHINRTPVAGTLRKLVYIPGKFVN
ADLDKASEENERQHFVVERADGVRIGFTQIAGLVARRIMPFVSMGSELATGQRVGLIRFGSRVDVYLPAGTTPKVLLGQR
TLAGETVIARIGQAATIDGIGQ

Sequences:

>Translated_262_residues
MSAPYPLSLGTLIPRRTAMSNIISSNRPGSGIKWQWPSIHPEGRKFLLIAGIVTLCFWLLGWEILGWLMLGVTLWVGAFF
RDPVRVTPASDDMIIAPADGLITQIAEVPPPPEIAGPDGLGDAPMLRVSIFMSVFDVHINRTPVAGTLRKLVYIPGKFVN
ADLDKASEENERQHFVVERADGVRIGFTQIAGLVARRIMPFVSMGSELATGQRVGLIRFGSRVDVYLPAGTTPKVLLGQR
TLAGETVIARIGQAATIDGIGQ
>Mature_261_residues
SAPYPLSLGTLIPRRTAMSNIISSNRPGSGIKWQWPSIHPEGRKFLLIAGIVTLCFWLLGWEILGWLMLGVTLWVGAFFR
DPVRVTPASDDMIIAPADGLITQIAEVPPPPEIAGPDGLGDAPMLRVSIFMSVFDVHINRTPVAGTLRKLVYIPGKFVNA
DLDKASEENERQHFVVERADGVRIGFTQIAGLVARRIMPFVSMGSELATGQRVGLIRFGSRVDVYLPAGTTPKVLLGQRT
LAGETVIARIGQAATIDGIGQ

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 28378; Mature: 28246

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPYPLSLGTLIPRRTAMSNIISSNRPGSGIKWQWPSIHPEGRKFLLIAGIVTLCFWLL
CCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHH
GWEILGWLMLGVTLWVGAFFRDPVRVTPASDDMIIAPADGLITQIAEVPPPPEIAGPDGL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCC
GDAPMLRVSIFMSVFDVHINRTPVAGTLRKLVYIPGKFVNADLDKASEENERQHFVVERA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHEEEEECC
DGVRIGFTQIAGLVARRIMPFVSMGSELATGQRVGLIRFGSRVDVYLPAGTTPKVLLGQR
CCCEECHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEECCEEEEEECCCCCCCEEECCC
TLAGETVIARIGQAATIDGIGQ
HHCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAPYPLSLGTLIPRRTAMSNIISSNRPGSGIKWQWPSIHPEGRKFLLIAGIVTLCFWLL
CCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHH
GWEILGWLMLGVTLWVGAFFRDPVRVTPASDDMIIAPADGLITQIAEVPPPPEIAGPDGL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCC
GDAPMLRVSIFMSVFDVHINRTPVAGTLRKLVYIPGKFVNADLDKASEENERQHFVVERA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHEEEEECC
DGVRIGFTQIAGLVARRIMPFVSMGSELATGQRVGLIRFGSRVDVYLPAGTTPKVLLGQR
CCCEECHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEECCEEEEEECCCCCCCEEECCC
TLAGETVIARIGQAATIDGIGQ
HHCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA