Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is yveL [H]

Identifier: 103487410

GI number: 103487410

Start: 2030975

End: 2031967

Strand: Reverse

Name: yveL [H]

Synonym: Sala_1926

Alternate gene names: 103487410

Gene position: 2031967-2030975 (Counterclockwise)

Preceding gene: 103487411

Following gene: 103487409

Centisome position: 60.74

GC content: 67.98

Gene sequence:

>993_bases
ATGAACGACCAACGCAAAATCAAGCGTCCACCCTCGCTGCTCGAACGCGCTGCCGACATGTTCGGGCTCGACCCCGTCGG
CAATGCGCCGACGATCGACGTATCGAGCCTGCCGCCCGAACCGGAGAAGAAGGCGAAGAAGGTCAAGGCGGAGCCCGTCG
CCGGTGCGCCGACCGCCGAACACTGCGAACCCGTCGTCGAAACCGCACCGTCGCCGGGCAAGGAGCTTGCAAAGGCCGCG
CCCGCGATCGTGCCGACGCGGCAGGGGACGATCGATCGCGAGCGGCTTGCGGCGCACGGGATGGTCGTGCCGGGCACCCC
GGTCACGGGCATTTCCGAAGAATATCGCATCGTGAAGCGCGAGTTGATCCGCAATATCGGCGGCGCGGGCAATCGCCCGA
TCCTGCCGCGCGGGCACCGCGTGCTGATCGCCTCGGCCAATCCGGGCGAGGGCAAGACCTTTTCGGCGGTCAATCTGGCG
CTCAGCCTGGCAGTCGAGGCCGATCACGACGTGCTGCTGATCGACGCCGACATTGCGAAGCCGAGCGTGCTCGACACGCT
CGGGCTGGAAAATGGCCCCGGCCTGATGGATGCGCTCGCCGACCCGCATCTGGCGGTTGGCGACTGCCTGATCCAGACCG
ACATTCCGGGGCTGAAAGTCATGCCCGCGGGCGCGCATCACATGCACGACACCGAATTGCTCGCCTCGGCGCGGACGGAG
GCGCTGCTCGCGCAGCTCGAAGCCGGGGCGCCGGGGCGCATCCTGATCCTCGATTCGCCGCCGATTCTCGCGGCATCGCC
CGCGGCGGTGCTCGCGGGGCATGTCGGACAGACGATCCTGGTCGTGCGCGCCGACACGACGCTTGAAAGCGCGCTGCGCG
ACGCGATCGGGCTGATGGGCGCGTGTCCGCAGATCCAGCTGCTTCTGAACGGGGTCAAATTCTCGCCGGGCGGGCGCCGC
TTCGGCACCTATTACGGACAGGGAAGCGCCTGA

Upstream 100 bases:

>100_bases
GGCTGGCAGGGGGAGGAGGCGCGCTCGTCGGGCTTTATGCGTTGCTGCTGGTCGTAGAGTTCATCCAGCGCGGCATGGTT
GCGTGACGGGGGACGATGAC

Downstream 100 bases:

>100_bases
TGAACGCGCATCTTGCCTTGCGCGGCGCGAGTATGCTGGTCGCGCTATCGCTCGCGGGAGCCGCGACCAGCGCGCACGCC
CAGTTTTCGGGCGATCCGGG

Product: protein-tyrosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNDQRKIKRPPSLLERAADMFGLDPVGNAPTIDVSSLPPEPEKKAKKVKAEPVAGAPTAEHCEPVVETAPSPGKELAKAA
PAIVPTRQGTIDRERLAAHGMVVPGTPVTGISEEYRIVKRELIRNIGGAGNRPILPRGHRVLIASANPGEGKTFSAVNLA
LSLAVEADHDVLLIDADIAKPSVLDTLGLENGPGLMDALADPHLAVGDCLIQTDIPGLKVMPAGAHHMHDTELLASARTE
ALLAQLEAGAPGRILILDSPPILAASPAAVLAGHVGQTILVVRADTTLESALRDAIGLMGACPQIQLLLNGVKFSPGGRR
FGTYYGQGSA

Sequences:

>Translated_330_residues
MNDQRKIKRPPSLLERAADMFGLDPVGNAPTIDVSSLPPEPEKKAKKVKAEPVAGAPTAEHCEPVVETAPSPGKELAKAA
PAIVPTRQGTIDRERLAAHGMVVPGTPVTGISEEYRIVKRELIRNIGGAGNRPILPRGHRVLIASANPGEGKTFSAVNLA
LSLAVEADHDVLLIDADIAKPSVLDTLGLENGPGLMDALADPHLAVGDCLIQTDIPGLKVMPAGAHHMHDTELLASARTE
ALLAQLEAGAPGRILILDSPPILAASPAAVLAGHVGQTILVVRADTTLESALRDAIGLMGACPQIQLLLNGVKFSPGGRR
FGTYYGQGSA
>Mature_330_residues
MNDQRKIKRPPSLLERAADMFGLDPVGNAPTIDVSSLPPEPEKKAKKVKAEPVAGAPTAEHCEPVVETAPSPGKELAKAA
PAIVPTRQGTIDRERLAAHGMVVPGTPVTGISEEYRIVKRELIRNIGGAGNRPILPRGHRVLIASANPGEGKTFSAVNLA
LSLAVEADHDVLLIDADIAKPSVLDTLGLENGPGLMDALADPHLAVGDCLIQTDIPGLKVMPAGAHHMHDTELLASARTE
ALLAQLEAGAPGRILILDSPPILAASPAAVLAGHVGQTILVVRADTTLESALRDAIGLMGACPQIQLLLNGVKFSPGGRR
FGTYYGQGSA

Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=167, Percent_Identity=31.7365269461078, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 34332; Mature: 34332

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQRKIKRPPSLLERAADMFGLDPVGNAPTIDVSSLPPEPEKKAKKVKAEPVAGAPTAE
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCHH
HCEPVVETAPSPGKELAKAAPAIVPTRQGTIDRERLAAHGMVVPGTPVTGISEEYRIVKR
HCCHHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHCCEEECCCCCCCCCHHHHHHHH
ELIRNIGGAGNRPILPRGHRVLIASANPGEGKTFSAVNLALSLAVEADHDVLLIDADIAK
HHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEHHEEEEEEEEEECCCCEEEEECCCCC
PSVLDTLGLENGPGLMDALADPHLAVGDCLIQTDIPGLKVMPAGAHHMHDTELLASARTE
CHHHHHHCCCCCCCHHHHHCCCCEECCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHH
ALLAQLEAGAPGRILILDSPPILAASPAAVLAGHVGQTILVVRADTTLESALRDAIGLMG
HHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHC
ACPQIQLLLNGVKFSPGGRRFGTYYGQGSA
CCCHHHHHHCCCEECCCCCEECCCCCCCCC
>Mature Secondary Structure
MNDQRKIKRPPSLLERAADMFGLDPVGNAPTIDVSSLPPEPEKKAKKVKAEPVAGAPTAE
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCHH
HCEPVVETAPSPGKELAKAAPAIVPTRQGTIDRERLAAHGMVVPGTPVTGISEEYRIVKR
HCCHHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHCCEEECCCCCCCCCHHHHHHHH
ELIRNIGGAGNRPILPRGHRVLIASANPGEGKTFSAVNLALSLAVEADHDVLLIDADIAK
HHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEHHEEEEEEEEEECCCCEEEEECCCCC
PSVLDTLGLENGPGLMDALADPHLAVGDCLIQTDIPGLKVMPAGAHHMHDTELLASARTE
CHHHHHHCCCCCCCHHHHHCCCCEECCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHH
ALLAQLEAGAPGRILILDSPPILAASPAAVLAGHVGQTILVVRADTTLESALRDAIGLMG
HHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHC
ACPQIQLLLNGVKFSPGGRRFGTYYGQGSA
CCCHHHHHHCCCEECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]