Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is exeA [H]

Identifier: 103487408

GI number: 103487408

Start: 2028002

End: 2029246

Strand: Reverse

Name: exeA [H]

Synonym: Sala_1924

Alternate gene names: 103487408

Gene position: 2029246-2028002 (Counterclockwise)

Preceding gene: 103487409

Following gene: 103487407

Centisome position: 60.66

GC content: 65.7

Gene sequence:

>1245_bases
ATGTACGATCAGTATTATGGTTTCACCGGCCGTCCGTTCCAGCTGACGCCAGATCCGCATTTCTATTTCGAGAGCGGGAC
GCACCGCAAGGCGATGTCCTATCTGGGCTATGGCCTCGCGCAGGGCGAGGGCTTCATCGTCATCACCGGCGACGTCGGTG
CGGGCAAGACGACGCTCGTCGGCCATCTGATGAACACGATCGACCCCAGCCGGCTGACCGCGGTCAAGCTGGTGTCGACG
CAGGTTGAGGGCGACGATCTGCTCCGCCTTGTCGCCGAACAATTCGGCATCGACTGGGAAGGGCAGAGCAAGGCCGAACT
GCTGCGGTCGATGGAACAATATCTGCGCGAACAGGCGCGCGCGGGCAAACGCACGCTGCTGATCGTCGATGAGGGACAAA
ATCTCGCCGTTTCGGCGCTCGAAGAACTGCGGATGCTGTCGAACTTCCAGCTCGGCGGTCATTCGCTCCTGCAAATCTTC
CTGCTCGGCCAGCCCGAGTTCCGCCAGACGCTGTTCCACTCGCCGACGCTCGAGCAATTGCGCCAGCGCGTGATCGCGAC
GCATCACCTCGACCCGATGGAGCCCGAAGAGGTCGAACCCTATATCCTCCACCGTCTCGGCAAGGTCGGCTGGACGGGCA
ACCCCAGCTTCAGCCCCGACGCTTTCGAGGAAATCTTCGATTACAGCGAAGGCGTGCCGCGCAAGCTCAATGTGCTGGTC
AGCCGCCTGCTGCTGTATGGCGCGGTCGAACAGATGAACCGCATCACCGCGCAGAATGTCCGCTCGGTGATCGCCGAGAT
CGAGGCCGACCGCGGCATCGACGCATCGACGCTCGCGCCGCTGCCGGTCGAGGAGGTCGTCGCGGCCGCCGCCACCGCCG
CCGCACCGACCCCGGCGCCCTTTGCGCCGCCCGCCGCGGCGAACGAAACGGCATCCGAATGGCCGCGCCGCGTGGACGAG
CCTGCTGCCGACGCCCCCGCGCCCTTCGCCGCGCCAGCCGAACCAGCGCGCATTGTCGCGCTGGCCTCGCAGCCTGTCGC
CGAGGCAGAAGATACCGCGTCCGCGGTTCCGGCGGTCGATCCAGACCATCTCGCCGCGCTGGAAAAGCAGGTTGCATCGC
TCGAGGCGCGGCTCGTCGAACAGGACGAAGCGCTGCGCCGTGTGCTCGACCTGCTCATCGAATGGGTCGAGCGCGATCCC
GAAAACGCGCCCAATCCGGCAAAGTCGCAGACCTGGGCGGCCTGA

Upstream 100 bases:

>100_bases
CTCAACGCTTTCGATCAGGACGGCTTCAACAGCCAGCTCATAGGTTCAGCTTTGGTGGGACTGCGTTACAACTTCTGACC
AAGCAACGGGATTTTTTGCG

Downstream 100 bases:

>100_bases
CAGCCCGGCCGAAACCGGCTATCGGGCCTGCGAAGGTGAGGAAAGATGCAGAACGGCCTGTCGGTCGATGTCGAGGACTG
GTTTCAGGTCGGCGCCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST
QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF
LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV
SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE
PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP
ENAPNPAKSQTWAA

Sequences:

>Translated_414_residues
MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST
QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF
LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV
SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE
PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP
ENAPNPAKSQTWAA
>Mature_414_residues
MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST
QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF
LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV
SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE
PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP
ENAPNPAKSQTWAA

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 45330; Mature: 45330

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLV
CCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
GHLMNTIDPSRLTAVKLVSTQVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQAR
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
AGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIFLLGQPEFRQTLFHSPTLEQL
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHH
RQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCC
FAPPAAANETASEWPRRVDEPAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVD
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC
PDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDPENAPNPAKSQTWAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLV
CCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
GHLMNTIDPSRLTAVKLVSTQVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQAR
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
AGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIFLLGQPEFRQTLFHSPTLEQL
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHH
RQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCC
FAPPAAANETASEWPRRVDEPAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVD
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC
PDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDPENAPNPAKSQTWAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]