| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is exeA [H]
Identifier: 103487408
GI number: 103487408
Start: 2028002
End: 2029246
Strand: Reverse
Name: exeA [H]
Synonym: Sala_1924
Alternate gene names: 103487408
Gene position: 2029246-2028002 (Counterclockwise)
Preceding gene: 103487409
Following gene: 103487407
Centisome position: 60.66
GC content: 65.7
Gene sequence:
>1245_bases ATGTACGATCAGTATTATGGTTTCACCGGCCGTCCGTTCCAGCTGACGCCAGATCCGCATTTCTATTTCGAGAGCGGGAC GCACCGCAAGGCGATGTCCTATCTGGGCTATGGCCTCGCGCAGGGCGAGGGCTTCATCGTCATCACCGGCGACGTCGGTG CGGGCAAGACGACGCTCGTCGGCCATCTGATGAACACGATCGACCCCAGCCGGCTGACCGCGGTCAAGCTGGTGTCGACG CAGGTTGAGGGCGACGATCTGCTCCGCCTTGTCGCCGAACAATTCGGCATCGACTGGGAAGGGCAGAGCAAGGCCGAACT GCTGCGGTCGATGGAACAATATCTGCGCGAACAGGCGCGCGCGGGCAAACGCACGCTGCTGATCGTCGATGAGGGACAAA ATCTCGCCGTTTCGGCGCTCGAAGAACTGCGGATGCTGTCGAACTTCCAGCTCGGCGGTCATTCGCTCCTGCAAATCTTC CTGCTCGGCCAGCCCGAGTTCCGCCAGACGCTGTTCCACTCGCCGACGCTCGAGCAATTGCGCCAGCGCGTGATCGCGAC GCATCACCTCGACCCGATGGAGCCCGAAGAGGTCGAACCCTATATCCTCCACCGTCTCGGCAAGGTCGGCTGGACGGGCA ACCCCAGCTTCAGCCCCGACGCTTTCGAGGAAATCTTCGATTACAGCGAAGGCGTGCCGCGCAAGCTCAATGTGCTGGTC AGCCGCCTGCTGCTGTATGGCGCGGTCGAACAGATGAACCGCATCACCGCGCAGAATGTCCGCTCGGTGATCGCCGAGAT CGAGGCCGACCGCGGCATCGACGCATCGACGCTCGCGCCGCTGCCGGTCGAGGAGGTCGTCGCGGCCGCCGCCACCGCCG CCGCACCGACCCCGGCGCCCTTTGCGCCGCCCGCCGCGGCGAACGAAACGGCATCCGAATGGCCGCGCCGCGTGGACGAG CCTGCTGCCGACGCCCCCGCGCCCTTCGCCGCGCCAGCCGAACCAGCGCGCATTGTCGCGCTGGCCTCGCAGCCTGTCGC CGAGGCAGAAGATACCGCGTCCGCGGTTCCGGCGGTCGATCCAGACCATCTCGCCGCGCTGGAAAAGCAGGTTGCATCGC TCGAGGCGCGGCTCGTCGAACAGGACGAAGCGCTGCGCCGTGTGCTCGACCTGCTCATCGAATGGGTCGAGCGCGATCCC GAAAACGCGCCCAATCCGGCAAAGTCGCAGACCTGGGCGGCCTGA
Upstream 100 bases:
>100_bases CTCAACGCTTTCGATCAGGACGGCTTCAACAGCCAGCTCATAGGTTCAGCTTTGGTGGGACTGCGTTACAACTTCTGACC AAGCAACGGGATTTTTTGCG
Downstream 100 bases:
>100_bases CAGCCCGGCCGAAACCGGCTATCGGGCCTGCGAAGGTGAGGAAAGATGCAGAACGGCCTGTCGGTCGATGTCGAGGACTG GTTTCAGGTCGGCGCCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP ENAPNPAKSQTWAA
Sequences:
>Translated_414_residues MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP ENAPNPAKSQTWAA >Mature_414_residues MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLVGHLMNTIDPSRLTAVKLVST QVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQARAGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIF LLGQPEFRQTLFHSPTLEQLRQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAPFAPPAAANETASEWPRRVDE PAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVDPDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDP ENAPNPAKSQTWAA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 45330; Mature: 45330
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLV CCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH GHLMNTIDPSRLTAVKLVSTQVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQAR HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC AGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIFLLGQPEFRQTLFHSPTLEQL CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHH RQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCC FAPPAAANETASEWPRRVDEPAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVD CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC PDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDPENAPNPAKSQTWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYDQYYGFTGRPFQLTPDPHFYFESGTHRKAMSYLGYGLAQGEGFIVITGDVGAGKTTLV CCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH GHLMNTIDPSRLTAVKLVSTQVEGDDLLRLVAEQFGIDWEGQSKAELLRSMEQYLREQAR HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC AGKRTLLIVDEGQNLAVSALEELRMLSNFQLGGHSLLQIFLLGQPEFRQTLFHSPTLEQL CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHH RQRVIATHHLDPMEPEEVEPYILHRLGKVGWTGNPSFSPDAFEEIFDYSEGVPRKLNVLV HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH SRLLLYGAVEQMNRITAQNVRSVIAEIEADRGIDASTLAPLPVEEVVAAAATAAAPTPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCC FAPPAAANETASEWPRRVDEPAADAPAPFAAPAEPARIVALASQPVAEAEDTASAVPAVD CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC PDHLAALEKQVASLEARLVEQDEALRRVLDLLIEWVERDPENAPNPAKSQTWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]