| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is ftsQ [H]
Identifier: 103487361
GI number: 103487361
Start: 1974417
End: 1975355
Strand: Reverse
Name: ftsQ [H]
Synonym: Sala_1877
Alternate gene names: 103487361
Gene position: 1975355-1974417 (Counterclockwise)
Preceding gene: 103487362
Following gene: 103487360
Centisome position: 59.05
GC content: 68.05
Gene sequence:
>939_bases GTGAGCAGTACGAAGATCAGGCGCGCCAAGGCGCCGCCGCGGCGGCCCGCGCGCGCGCCGAAGAAACGGCGCAAGGTTCA GCAGTCGCGGCTCAACGCGATCATCAACGCGCTGCCGATCAGTCCGCAGCGGCTGCAAAAGATCGCCAACTGGACGGTGG GCGTCAGCCTGTTCGCCGTTGCCGGCCTCGCCGCGCACGCAACGGGCGTCACTGCGAAAATCCACGAGGAATATGCGCAG GCGGTCGGCCGCGCGGGCTTTCAGGTCAGGAAGGTCGAGGTCGTCGGCGCCGACCGGATCGACCGGCTGAAAGTCTATGA CATCGCGCTCGCGCAGAAGGACCGCTCGATGGCGGCGGTCGACCTCGAAGATGTGCGTCGCGACCTGATGCGATATGGCT GGATCAAGGACGCGCGCGTGTCGCGCCGCCTTCCCGATACGCTGGTGATCGACATCGTCGAACGAACACCGGCCGCGATC TGGCAGCACAATAATCGCCTGTCGCTGATCGACGACAAGGGCGTCGTCCTCGAACGCGTCACCGTCGCGACGATGCCCGA CCTGCCGCTGGTGATCGGCCCCAGGGCGAACCAGCGCGCGCAGGATCTGGCGCGCCTGTTGTCGGAGGCGAGCAGTCTCA AGGAACTGCTCGCGGGCGCGACGTGGGTCGGCAACCGCCGCTGGGATTTGCGCTTCCGCAGCGGCGAGACGCTGTCGCTG CCCGAAGGCGAAGAGGCGGCGAAGGCGGCGCTGGCCAAATTTGCGCACATGGATGGTGCGAACCGCCTGCTCGGCCGCGG CATCTTGCGTTTCGACATGCGCGATCCCGCGCGCTTCGTGCTGCGCCTGCCGCACGAGGGGCAGGTGGCGCCTGCCCAGC TCGACGACGCGCGCGCCGCCGTGGACGCGGTCGCTGCAAGTCAGTCGAACGAAGGCTAG
Upstream 100 bases:
>100_bases CCGCTCAGCCTCGTCCCCGAACAGGCGCGCGCGGTCGGGATGGATTACGCCGAACTGGTCGAACGCATCGTCGAGGAAGC ACTGACATGAGGGGGCGGCC
Downstream 100 bases:
>100_bases AAGATGGCGCCGCCGCGCATCGAAAAGATCATCACCGCGCTCGATGTCGGGTCGTGGAAGGTCTGCGCGCTGATCGCGGG GCAGACCGCCGACGGCAAGC
Product: cell division protein FtsQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSSTKIRRAKAPPRRPARAPKKRRKVQQSRLNAIINALPISPQRLQKIANWTVGVSLFAVAGLAAHATGVTAKIHEEYAQ AVGRAGFQVRKVEVVGADRIDRLKVYDIALAQKDRSMAAVDLEDVRRDLMRYGWIKDARVSRRLPDTLVIDIVERTPAAI WQHNNRLSLIDDKGVVLERVTVATMPDLPLVIGPRANQRAQDLARLLSEASSLKELLAGATWVGNRRWDLRFRSGETLSL PEGEEAAKAALAKFAHMDGANRLLGRGILRFDMRDPARFVLRLPHEGQVAPAQLDDARAAVDAVAASQSNEG
Sequences:
>Translated_312_residues MSSTKIRRAKAPPRRPARAPKKRRKVQQSRLNAIINALPISPQRLQKIANWTVGVSLFAVAGLAAHATGVTAKIHEEYAQ AVGRAGFQVRKVEVVGADRIDRLKVYDIALAQKDRSMAAVDLEDVRRDLMRYGWIKDARVSRRLPDTLVIDIVERTPAAI WQHNNRLSLIDDKGVVLERVTVATMPDLPLVIGPRANQRAQDLARLLSEASSLKELLAGATWVGNRRWDLRFRSGETLSL PEGEEAAKAALAKFAHMDGANRLLGRGILRFDMRDPARFVLRLPHEGQVAPAQLDDARAAVDAVAASQSNEG >Mature_311_residues SSTKIRRAKAPPRRPARAPKKRRKVQQSRLNAIINALPISPQRLQKIANWTVGVSLFAVAGLAAHATGVTAKIHEEYAQA VGRAGFQVRKVEVVGADRIDRLKVYDIALAQKDRSMAAVDLEDVRRDLMRYGWIKDARVSRRLPDTLVIDIVERTPAAIW QHNNRLSLIDDKGVVLERVTVATMPDLPLVIGPRANQRAQDLARLLSEASSLKELLAGATWVGNRRWDLRFRSGETLSLP EGEEAAKAALAKFAHMDGANRLLGRGILRFDMRDPARFVLRLPHEGQVAPAQLDDARAAVDAVAASQSNEG
Specific function: This protein may be involved in septum formation [H]
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005548 - InterPro: IPR013685 [H]
Pfam domain/function: PF03799 FtsQ; PF08478 POTRA_1 [H]
EC number: NA
Molecular weight: Translated: 34451; Mature: 34320
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTKIRRAKAPPRRPARAPKKRRKVQQSRLNAIINALPISPQRLQKIANWTVGVSLFAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGLAAHATGVTAKIHEEYAQAVGRAGFQVRKVEVVGADRIDRLKVYDIALAQKDRSMAAV HHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEHHHHHHHHCCCCEEEE DLEDVRRDLMRYGWIKDARVSRRLPDTLVIDIVERTPAAIWQHNNRLSLIDDKGVVLERV CHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCEEEEE TVATMPDLPLVIGPRANQRAQDLARLLSEASSLKELLAGATWVGNRRWDLRFRSGETLSL EEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCEECC PEGEEAAKAALAKFAHMDGANRLLGRGILRFDMRDPARFVLRLPHEGQVAPAQLDDARAA CCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCHHHEEECCCCCCCCCCHHHHHHHH VDAVAASQSNEG HHHHHHCCCCCC >Mature Secondary Structure SSTKIRRAKAPPRRPARAPKKRRKVQQSRLNAIINALPISPQRLQKIANWTVGVSLFAV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGLAAHATGVTAKIHEEYAQAVGRAGFQVRKVEVVGADRIDRLKVYDIALAQKDRSMAAV HHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEHHHHHHHHCCCCEEEE DLEDVRRDLMRYGWIKDARVSRRLPDTLVIDIVERTPAAIWQHNNRLSLIDDKGVVLERV CHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCEEEEE TVATMPDLPLVIGPRANQRAQDLARLLSEASSLKELLAGATWVGNRRWDLRFRSGETLSL EEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCEECC PEGEEAAKAALAKFAHMDGANRLLGRGILRFDMRDPARFVLRLPHEGQVAPAQLDDARAA CCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCHHHEEECCCCCCCCCCHHHHHHHH VDAVAASQSNEG HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9632248 [H]