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The map label for this gene is yraR [H]

Identifier: 103487356

GI number: 103487356

Start: 1968062

End: 1968709

Strand: Reverse

Name: yraR [H]

Synonym: Sala_1872

Alternate gene names: 103487356

Gene position: 1968709-1968062 (Counterclockwise)

Preceding gene: 103487357

Following gene: 103487355

Centisome position: 58.85

GC content: 69.14

Gene sequence:

>648_bases
ATGCCTGATGCGCTGATCGTCGGCGCGACCGGGATGGTCGGGCGCGCGGTAATCGCGCATTTCGGTGCAACGCCCCTGAC
CGTGCTTGCGCGTCGGCCGGTCGACGGCCTTGCGCCGCATCACAAAGACGTGATTGCACCGCCCGAGGACTGGGCCGACA
TCATCGCCGCCGAAAGGCCGACGGTGCTCATCTCCTGTCTCGGCACGACGATCCGCCGGGCGGGATCGCAGGCCGCCTTT
CGCGCGGTCGACCACGACCTTGTGCTCGCGGCTGCCGAGGGTGCGAGGGCGGGAGGAACGCGACATATGATCGCCGTCAG
TTCGGTCGGCGCGTCGGCAAAGAGCGGCAATTTCTATCTGCGCACCAAGGGGGAGACCGAGCGCGACCTGATCACGCTGG
GTTTTGACCGGCTCGACCTCATCCGCCCCGGCCTGCTTCGCGGCGACCGGCCCGGCCCGCCGCGGCTGGGCGAGGGACTC
GCGACGATCGCCGCGCCGCTCGCCGATGCGCTGCTCCACGGGAGCTTTCGTCGTTACCGGTCGATTTCGGTCGTCCACGT
CGCCGCGGCGATCGTGGCACTCGCCGCCGAGGGTGGTTCGGGCGTGCATATCCACGAAAACGACGCGATCCGCGCGCTCG
CCGATTGA

Upstream 100 bases:

>100_bases
CGGCATATCGGCGACTATATCGCGGGGATGACCGACCGCTTTGCCATCGACCGCTACGCCGAAATCTTCGGACGCGATGC
CGTGCCGGCGCCGCTCGCCC

Downstream 100 bases:

>100_bases
CTCCGCAAGGGGGCAGCGCCAAGGCTCGGCTGTCTGTCGGGCCTCGCAAGAGATTCGACCGGCCGCGCGGGAGAGCGTGA
GGGCAGGGCAACCGGCGCCT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MPDALIVGATGMVGRAVIAHFGATPLTVLARRPVDGLAPHHKDVIAPPEDWADIIAAERPTVLISCLGTTIRRAGSQAAF
RAVDHDLVLAAAEGARAGGTRHMIAVSSVGASAKSGNFYLRTKGETERDLITLGFDRLDLIRPGLLRGDRPGPPRLGEGL
ATIAAPLADALLHGSFRRYRSISVVHVAAAIVALAAEGGSGVHIHENDAIRALAD

Sequences:

>Translated_215_residues
MPDALIVGATGMVGRAVIAHFGATPLTVLARRPVDGLAPHHKDVIAPPEDWADIIAAERPTVLISCLGTTIRRAGSQAAF
RAVDHDLVLAAAEGARAGGTRHMIAVSSVGASAKSGNFYLRTKGETERDLITLGFDRLDLIRPGLLRGDRPGPPRLGEGL
ATIAAPLADALLHGSFRRYRSISVVHVAAAIVALAAEGGSGVHIHENDAIRALAD
>Mature_214_residues
PDALIVGATGMVGRAVIAHFGATPLTVLARRPVDGLAPHHKDVIAPPEDWADIIAAERPTVLISCLGTTIRRAGSQAAFR
AVDHDLVLAAAEGARAGGTRHMIAVSSVGASAKSGNFYLRTKGETERDLITLGFDRLDLIRPGLLRGDRPGPPRLGEGLA
TIAAPLADALLHGSFRRYRSISVVHVAAAIVALAAEGGSGVHIHENDAIRALAD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=197, Percent_Identity=34.010152284264, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI148728168, Length=197, Percent_Identity=34.010152284264, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI148728164, Length=197, Percent_Identity=34.010152284264, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI148728166, Length=219, Percent_Identity=32.8767123287671, Blast_Score=85, Evalue=5e-17,
Organism=Escherichia coli, GI87082218, Length=227, Percent_Identity=35.2422907488987, Blast_Score=94, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71983631, Length=220, Percent_Identity=35.9090909090909, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6320840, Length=185, Percent_Identity=32.972972972973, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 22370; Mature: 22239

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDALIVGATGMVGRAVIAHFGATPLTVLARRPVDGLAPHHKDVIAPPEDWADIIAAERP
CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TVLISCLGTTIRRAGSQAAFRAVDHDLVLAAAEGARAGGTRHMIAVSSVGASAKSGNFYL
EEEHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
RTKGETERDLITLGFDRLDLIRPGLLRGDRPGPPRLGEGLATIAAPLADALLHGSFRRYR
EECCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SISVVHVAAAIVALAAEGGSGVHIHENDAIRALAD
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
PDALIVGATGMVGRAVIAHFGATPLTVLARRPVDGLAPHHKDVIAPPEDWADIIAAERP
CCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TVLISCLGTTIRRAGSQAAFRAVDHDLVLAAAEGARAGGTRHMIAVSSVGASAKSGNFYL
EEEHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
RTKGETERDLITLGFDRLDLIRPGLLRGDRPGPPRLGEGLATIAAPLADALLHGSFRRYR
EECCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SISVVHVAAAIVALAAEGGSGVHIHENDAIRALAD
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]