| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487159
Identifier: 103487159
GI number: 103487159
Start: 1762555
End: 1762713
Strand: Reverse
Name: 103487159
Synonym: Sala_1674
Alternate gene names: NA
Gene position: 1762713-1762555 (Counterclockwise)
Preceding gene: 103487160
Following gene: 103487158
Centisome position: 52.69
GC content: 62.26
Gene sequence:
>159_bases ATGAACTATGATGATCTCAGGCATTTCGCCGACAGCTGGGGCCTGCTCGCCATGGCGCTGCTGTTCCTCTTCCTTGTCGC CTGGCCGTTCCGCAGGGGTGCGCGCCGCCGCAACGAGGACGCCGCGAAGCTGATCTTCAAGGACGACGAACATGGCTGA
Upstream 100 bases:
>100_bases AAATGGATGCGCTCATCGCCTACCTCCAGATGCTCGGCACGCTCGTCGACGTCGAAAGGGCCGCGCCGCAGGAACGCGCC GGTGAAACGGAGGCGGGGCG
Downstream 100 bases:
>100_bases GAACAAGCGCATCGACGAAGCGACCGGCACGCGCACGGTCGGCCACGAATGGGACGGGATCGAGGAACTCGACACGCCGA TGCCGCGCTGGTGGCTGTGG
Product: Cbb3-type cytochrome oxidase component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MNYDDLRHFADSWGLLAMALLFLFLVAWPFRRGARRRNEDAAKLIFKDDEHG
Sequences:
>Translated_52_residues MNYDDLRHFADSWGLLAMALLFLFLVAWPFRRGARRRNEDAAKLIFKDDEHG >Mature_52_residues MNYDDLRHFADSWGLLAMALLFLFLVAWPFRRGARRRNEDAAKLIFKDDEHG
Specific function: Unknown
COG id: COG4736
COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6167; Mature: 6167
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYDDLRHFADSWGLLAMALLFLFLVAWPFRRGARRRNEDAAKLIFKDDEHG CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MNYDDLRHFADSWGLLAMALLFLFLVAWPFRRGARRRNEDAAKLIFKDDEHG CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA