Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487067

Identifier: 103487067

GI number: 103487067

Start: 1655327

End: 1656631

Strand: Reverse

Name: 103487067

Synonym: Sala_1582

Alternate gene names: NA

Gene position: 1656631-1655327 (Counterclockwise)

Preceding gene: 103487068

Following gene: 103487066

Centisome position: 49.52

GC content: 63.98

Gene sequence:

>1305_bases
GTGGCTGACGGGATGGCGGGATCGCGCGTCGCTTCATGGAGATCGTTTGGCGCGGGCCGGTGGCTCGTGCTTGCTGTGGG
GGTGGTGCTCGCGCTCTATTCGGCGGCCTTTTCGTTCGCGCTCATCTTTTCAGGTCGACAGCCGGCCGTGACAATGGCGC
TTGTGCCATGGCACAGCACGGCGCCCACGGCGATCGCTGACCGGCTGATGCTGGCAGCGGCGCAGGAGAAGTTTCGCGAA
GCTGGTGGGCGCGATGCACCGACCGCCGCCGCGATGACCGCACTTCTCAGCCGCGTCGGGCCATCCTTGCCCCCGGAAAA
GGCGGCGCCGATCCGTGAACTGGCGCTTGAGGGGCTGTCGCAATCCGCACTGAACAGCGCAGCGCTACGCCAACTGGCTT
TCCTGGAAAAAGACCGGGCGAAGCGTAAGCATCTGCTCGACCTTGCCCTGCGGGTTTCACGCCGCGACGTGCTCGCCGGC
GTACAGTCGGCGGAGATCAAGTTTCTCGATAATGAAGCCGATGCCGGGCTTGCTGACCTCGACCGCGCGCTGACGGTTTC
CGAGAAGGTTGACGATCTTGTCCTGCCGATAATTCTTCAGGCATCGAGCGATCCCGAAGCGCTGGCGCAGATCAGGCGTC
GTGTCGCGAAAAATCCGCTGTGGATCGAGCGTCTGCTCCGATACGGAATCGACAACCCGGTCTTCGCGCCGCGTGTTGCC
GACATCGTCTCCGCCATTCCCGCGCGCTCGACGGCGCGCGCGCAAGGCTATGGGCAGCAATTGATCGACATTCTGGTGAG
CGCGCGCGAATATCCCGCGGCGTTCAAGGTGTATGACGTTTACTCGCCGACCCGCCAGGCCGTCGAGCGGATGGGGGGTG
GAGCATTCCGGCCGATCGACTGGCAGTTGACCGAGAATTATGACGCCGGCGGCCGCGAGCTCGGCGCGCGTGAGGTCGAT
ATATTTGCCAGTCCGGAACGGCAGGGTGAGTTTGCGCGGATTCTGATGCGCTCGCGTCCCGGCAGCTACAGCCTCAGCTT
GCGTGCTCGCGAAGTCGAAGCGGCCGAAGGGCGATTGACGTTCAACATGCTGTGTCTTGATGAGAAGCAGGAACGGCAGG
GCGCGTCGCTGAGCCTGCCGCTCAGGCAGGGCCCGATGCGGTTCGATTATAGCGTTCCACCGACCGGATGCGGTTATCAG
TGGCTCATTCTGGGGATTGGAGCCGAACTCGACTCTGCAGCCGCGCTGATCGACTCAGTAACGCTGTCTCGCACCCCGGC
TCGCGTTGCGGGCCCAGGGTCCTGA

Upstream 100 bases:

>100_bases
GTCATTTTGACGAAACTCGACAAGCGTGATTCGGAATATGGCTATGGATACGCATATTCCTATGAATATACGAGCCGAGG
TGCCGAAACCGAGTCGGCCA

Downstream 100 bases:

>100_bases
TGTCGGTTCTGGCGATCATTCCGGCCCGTGGCGGGTCAAAGGGCGTGCCCGGAAAGAATCTGCGGTTGCTGGCTGGCAAG
CCCTTGATCTCGTGGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MADGMAGSRVASWRSFGAGRWLVLAVGVVLALYSAAFSFALIFSGRQPAVTMALVPWHSTAPTAIADRLMLAAAQEKFRE
AGGRDAPTAAAMTALLSRVGPSLPPEKAAPIRELALEGLSQSALNSAALRQLAFLEKDRAKRKHLLDLALRVSRRDVLAG
VQSAEIKFLDNEADAGLADLDRALTVSEKVDDLVLPIILQASSDPEALAQIRRRVAKNPLWIERLLRYGIDNPVFAPRVA
DIVSAIPARSTARAQGYGQQLIDILVSAREYPAAFKVYDVYSPTRQAVERMGGGAFRPIDWQLTENYDAGGRELGAREVD
IFASPERQGEFARILMRSRPGSYSLSLRAREVEAAEGRLTFNMLCLDEKQERQGASLSLPLRQGPMRFDYSVPPTGCGYQ
WLILGIGAELDSAAALIDSVTLSRTPARVAGPGS

Sequences:

>Translated_434_residues
MADGMAGSRVASWRSFGAGRWLVLAVGVVLALYSAAFSFALIFSGRQPAVTMALVPWHSTAPTAIADRLMLAAAQEKFRE
AGGRDAPTAAAMTALLSRVGPSLPPEKAAPIRELALEGLSQSALNSAALRQLAFLEKDRAKRKHLLDLALRVSRRDVLAG
VQSAEIKFLDNEADAGLADLDRALTVSEKVDDLVLPIILQASSDPEALAQIRRRVAKNPLWIERLLRYGIDNPVFAPRVA
DIVSAIPARSTARAQGYGQQLIDILVSAREYPAAFKVYDVYSPTRQAVERMGGGAFRPIDWQLTENYDAGGRELGAREVD
IFASPERQGEFARILMRSRPGSYSLSLRAREVEAAEGRLTFNMLCLDEKQERQGASLSLPLRQGPMRFDYSVPPTGCGYQ
WLILGIGAELDSAAALIDSVTLSRTPARVAGPGS
>Mature_433_residues
ADGMAGSRVASWRSFGAGRWLVLAVGVVLALYSAAFSFALIFSGRQPAVTMALVPWHSTAPTAIADRLMLAAAQEKFREA
GGRDAPTAAAMTALLSRVGPSLPPEKAAPIRELALEGLSQSALNSAALRQLAFLEKDRAKRKHLLDLALRVSRRDVLAGV
QSAEIKFLDNEADAGLADLDRALTVSEKVDDLVLPIILQASSDPEALAQIRRRVAKNPLWIERLLRYGIDNPVFAPRVAD
IVSAIPARSTARAQGYGQQLIDILVSAREYPAAFKVYDVYSPTRQAVERMGGGAFRPIDWQLTENYDAGGRELGAREVDI
FASPERQGEFARILMRSRPGSYSLSLRAREVEAAEGRLTFNMLCLDEKQERQGASLSLPLRQGPMRFDYSVPPTGCGYQW
LILGIGAELDSAAALIDSVTLSRTPARVAGPGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46969; Mature: 46838

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGMAGSRVASWRSFGAGRWLVLAVGVVLALYSAAFSFALIFSGRQPAVTMALVPWHST
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCC
APTAIADRLMLAAAQEKFREAGGRDAPTAAAMTALLSRVGPSLPPEKAAPIRELALEGLS
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QSALNSAALRQLAFLEKDRAKRKHLLDLALRVSRRDVLAGVQSAEIKFLDNEADAGLADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
DRALTVSEKVDDLVLPIILQASSDPEALAQIRRRVAKNPLWIERLLRYGIDNPVFAPRVA
HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
DIVSAIPARSTARAQGYGQQLIDILVSAREYPAAFKVYDVYSPTRQAVERMGGGAFRPID
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC
WQLTENYDAGGRELGAREVDIFASPERQGEFARILMRSRPGSYSLSLRAREVEAAEGRLT
EEEECCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCEE
FNMLCLDEKQERQGASLSLPLRQGPMRFDYSVPPTGCGYQWLILGIGAELDSAAALIDSV
EEEEECCCHHHHCCCCEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
TLSRTPARVAGPGS
HHCCCCCCCCCCCC
>Mature Secondary Structure 
ADGMAGSRVASWRSFGAGRWLVLAVGVVLALYSAAFSFALIFSGRQPAVTMALVPWHST
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCC
APTAIADRLMLAAAQEKFREAGGRDAPTAAAMTALLSRVGPSLPPEKAAPIRELALEGLS
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QSALNSAALRQLAFLEKDRAKRKHLLDLALRVSRRDVLAGVQSAEIKFLDNEADAGLADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
DRALTVSEKVDDLVLPIILQASSDPEALAQIRRRVAKNPLWIERLLRYGIDNPVFAPRVA
HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
DIVSAIPARSTARAQGYGQQLIDILVSAREYPAAFKVYDVYSPTRQAVERMGGGAFRPID
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC
WQLTENYDAGGRELGAREVDIFASPERQGEFARILMRSRPGSYSLSLRAREVEAAEGRLT
EEEECCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCEE
FNMLCLDEKQERQGASLSLPLRQGPMRFDYSVPPTGCGYQWLILGIGAELDSAAALIDSV
EEEEECCCHHHHCCCCEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
TLSRTPARVAGPGS
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA