| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cysQ [H]
Identifier: 103487010
GI number: 103487010
Start: 1591160
End: 1591906
Strand: Reverse
Name: cysQ [H]
Synonym: Sala_1525
Alternate gene names: 103487010
Gene position: 1591906-1591160 (Counterclockwise)
Preceding gene: 103487011
Following gene: 103487008
Centisome position: 47.59
GC content: 71.35
Gene sequence:
>747_bases ATGAGCACGGCCGAGACCGACGACCAGCTTGCGCAGCGCCTCGCGGCAGCGGCAGGGGCGATTTTGCTCGACCTGCGTGC GCGCGGCGACCTTGAAGGCAAGGCGCTGGGGCAGGCGGGCGACGAGGCCGCCAATGCGATGCTGTGCCGCGAAATCCGCG CGGCACGCCCCGGCGATGCGCTGCTCTCCGAAGAGGAGAAGGACAATGTGGCGCGCTGCGCCCGTTCGCGCGTGTGGATC GTCGATCCGCTCGACGGCACGCGCGAATATGGCGAGGGGCGGAGCGACTGGGCGGTGCATGTCGCGCTGGCGATCGATGG CGTTGCCGCGGTCGGCGCGGTCGCGCTGCCGGGGCTGGGCGTGACGCTGACATCGGCGTCGCCGCCGCCGCTCGCGCCGC CGAACCACCCGCCAAAGATGCTGGTCAGCCGCACGCGCCCCGCCGCCGAAGCCCTGTTCGTCGCCGAACGGCTCGGTGCC GAACTGGTCGCGATGGGGTCGGCCGGCGCGAAGGCGATGGCGGTCGTGCGCGGCGAGGCCGACATCTATCTGCACACCGG CGGGCAATATGAATGGGACAATTGTGCCCCCGCCGCGGTGGCGGCGGCCGCGGGTCTCCATGTGAGCCGCGCCGACGGGT CGCCGCTGCGCTACAACAATGCCGACACCTATCTTCCCGACCTGCTGATCTGTCGCAAGGAGCTGGCGGAGACGGTGTTG CGACGGGCGCGGGAGTTTGGCCGGTAG
Upstream 100 bases:
>100_bases ACAGCCCCTATGAAGCGCCCGAAACGCCTGAAATCCGCATCGACACGACCGCGATGTCGCCCGAGGCCGCGGCCGATCTG ATTGTCGAGCATCTGCTCGG
Downstream 100 bases:
>100_bases CGCCTCACAGCAGCCGTGCCCCGGCGAAAGCCGGGGGGCAACAGTAAGGCGACAGTCCGCTCCCCACCCCGAAATGGTCG TTTCGTTTCGGTCGGGACCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: PAP phosphatase; 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; D-fructose-1,6-bisphosphate 1-phosphohydrolase; DPNPase; Fructose-1,6-bisphosphatase; FBPase; Inositol-1-monophosphatase; I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSTAETDDQLAQRLAAAAGAILLDLRARGDLEGKALGQAGDEAANAMLCREIRAARPGDALLSEEEKDNVARCARSRVWI VDPLDGTREYGEGRSDWAVHVALAIDGVAAVGAVALPGLGVTLTSASPPPLAPPNHPPKMLVSRTRPAAEALFVAERLGA ELVAMGSAGAKAMAVVRGEADIYLHTGGQYEWDNCAPAAVAAAAGLHVSRADGSPLRYNNADTYLPDLLICRKELAETVL RRAREFGR
Sequences:
>Translated_248_residues MSTAETDDQLAQRLAAAAGAILLDLRARGDLEGKALGQAGDEAANAMLCREIRAARPGDALLSEEEKDNVARCARSRVWI VDPLDGTREYGEGRSDWAVHVALAIDGVAAVGAVALPGLGVTLTSASPPPLAPPNHPPKMLVSRTRPAAEALFVAERLGA ELVAMGSAGAKAMAVVRGEADIYLHTGGQYEWDNCAPAAVAAAAGLHVSRADGSPLRYNNADTYLPDLLICRKELAETVL RRAREFGR >Mature_247_residues STAETDDQLAQRLAAAAGAILLDLRARGDLEGKALGQAGDEAANAMLCREIRAARPGDALLSEEEKDNVARCARSRVWIV DPLDGTREYGEGRSDWAVHVALAIDGVAAVGAVALPGLGVTLTSASPPPLAPPNHPPKMLVSRTRPAAEALFVAERLGAE LVAMGSAGAKAMAVVRGEADIYLHTGGQYEWDNCAPAAVAAAAGLHVSRADGSPLRYNNADTYLPDLLICRKELAETVLR RAREFGR
Specific function: Phosphatase with a broad specificity. Its primary physiological function is to dephosphorylate 3'-phosphoadenosine 5'-phosphate (PAP) and 3'-phosphoadenosine 5'-phosphosulfate (PAPS). Thus, plays a role in mycobacterial sulfur metabolism, since it can ser
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Localized On The Inner Face Of The Cytoplasm Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=238, Percent_Identity=28.9915966386555, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71995905, Length=244, Percent_Identity=26.2295081967213, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71995897, Length=244, Percent_Identity=26.2295081967213, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7; =3.1.3.11; =3.1.3.25 [H]
Molecular weight: Translated: 26026; Mature: 25895
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAETDDQLAQRLAAAAGAILLDLRARGDLEGKALGQAGDEAANAMLCREIRAARPGDA CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHH LLSEEEKDNVARCARSRVWIVDPLDGTREYGEGRSDWAVHVALAIDGVAAVGAVALPGLG HHCCCHHHHHHHHHHCCEEEECCCCCCHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCCC VTLTSASPPPLAPPNHPPKMLVSRTRPAAEALFVAERLGAELVAMGSAGAKAMAVVRGEA EEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC DIYLHTGGQYEWDNCAPAAVAAAAGLHVSRADGSPLRYNNADTYLPDLLICRKELAETVL EEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHH RRAREFGR HHHHHHCC >Mature Secondary Structure STAETDDQLAQRLAAAAGAILLDLRARGDLEGKALGQAGDEAANAMLCREIRAARPGDA CCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHH LLSEEEKDNVARCARSRVWIVDPLDGTREYGEGRSDWAVHVALAIDGVAAVGAVALPGLG HHCCCHHHHHHHHHHCCEEEECCCCCCHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCCC VTLTSASPPPLAPPNHPPKMLVSRTRPAAEALFVAERLGAELVAMGSAGAKAMAVVRGEA EEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC DIYLHTGGQYEWDNCAPAAVAAAAGLHVSRADGSPLRYNNADTYLPDLLICRKELAETVL EEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHH RRAREFGR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]