Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486984

Identifier: 103486984

GI number: 103486984

Start: 1562062

End: 1562994

Strand: Reverse

Name: 103486984

Synonym: Sala_1499

Alternate gene names: NA

Gene position: 1562994-1562062 (Counterclockwise)

Preceding gene: 103486987

Following gene: 103486983

Centisome position: 46.72

GC content: 68.06

Gene sequence:

>933_bases
ATGACGGGCGGCGGAAGCGGAGAGGTCGGCGAGCGCGTCGCGCTGCGCATCGAAGTCGCGGGGCGGACGCTCGGCCATGT
CCGGCGCGAGCTTGCCGTCGTCGCGCATGGGCTTGACGATATATGGGCGCCCGCGGCGCGCGCGATGCCACCCCCGGGGC
GCGACGGCTGGCTGCTGCGATCCTTGCCGCGCGAACGCTTGCCCGCCCTGAGGGCGGAATTGACGGGTTGGCTGGTCGCC
GAGCGTCAGGCCTATCCACGCCATTATGTGCCGATGGAGGGACAGGACTTCGACGACTGGTGGCAGGGCTTTTCGTCCAG
GACCCGTTCCACCCTGTCGCGCAAGGCGCGGCGGCTCGCCGATCATTGCGGGGGCGGTGTCTCGGTGCGCTGCTATCGAA
CCGCCGACGAGATTGCCGAGTTCATGGGCATCGCCGCCGCACTGTCGGCGCAGACCTATCAGGCGCGGCTGATGCAGGCG
GGGCTTCCCGCGGCCGAAGCCGATCGCGCATATGCGGTCGCAGCCGCGGCCGAAGACCGGGTTCGCGCCTTTCTGTTGTT
CGCGGGGGAGCGCGCGATCGCCTATCTTTACCTGCCCGTCGAGCGCGACATATTGATCTATGCCCATCCGGGCTATGATC
CCGCGTTTGCTGCGCTGTCGCCGGGAAGCGTGCTGCATGTCGAAGCGATGCGCGCGCTTTTCGCCGAGGGGCGGTTTCGC
GCCTTCGACTTCACCGAGGGCGATGGCGCGCACAAGGCGCAATTCGGTCGCGCGTCGGTCGATTGCGCCGACATTCTGGT
GCTGCGGCCGACGCTGCGTAACCGCGCGGCACTCGGACTGATGAAGGGGGTCGACCGGCTGGCTGGCGCTGGCAAATATC
TGCTCGATCGCCTGGGTCTGCGCGCGAAAGCCAAGGCGCTGATTCGGAGATGA

Upstream 100 bases:

>100_bases
CCCATTGCTGTCATTCCGGAACGTCCCTCAAATCGTGTAAGCCAATCATAACCATGTGCTGCCAAAGCGGAATAGGGGTA
TATCGAATAATGGGCAGGAG

Downstream 100 bases:

>100_bases
TTCGGCCTCGATGGCCGGGATGTTGTGGTGCGGACGGCGGGACTTGAACCCGCATGACACCAGGGTCGGCAGATTTTAAG
TCTGCTGCGTCTACCGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTGGGSGEVGERVALRIEVAGRTLGHVRRELAVVAHGLDDIWAPAARAMPPPGRDGWLLRSLPRERLPALRAELTGWLVA
ERQAYPRHYVPMEGQDFDDWWQGFSSRTRSTLSRKARRLADHCGGGVSVRCYRTADEIAEFMGIAAALSAQTYQARLMQA
GLPAAEADRAYAVAAAAEDRVRAFLLFAGERAIAYLYLPVERDILIYAHPGYDPAFAALSPGSVLHVEAMRALFAEGRFR
AFDFTEGDGAHKAQFGRASVDCADILVLRPTLRNRAALGLMKGVDRLAGAGKYLLDRLGLRAKAKALIRR

Sequences:

>Translated_310_residues
MTGGGSGEVGERVALRIEVAGRTLGHVRRELAVVAHGLDDIWAPAARAMPPPGRDGWLLRSLPRERLPALRAELTGWLVA
ERQAYPRHYVPMEGQDFDDWWQGFSSRTRSTLSRKARRLADHCGGGVSVRCYRTADEIAEFMGIAAALSAQTYQARLMQA
GLPAAEADRAYAVAAAAEDRVRAFLLFAGERAIAYLYLPVERDILIYAHPGYDPAFAALSPGSVLHVEAMRALFAEGRFR
AFDFTEGDGAHKAQFGRASVDCADILVLRPTLRNRAALGLMKGVDRLAGAGKYLLDRLGLRAKAKALIRR
>Mature_309_residues
TGGGSGEVGERVALRIEVAGRTLGHVRRELAVVAHGLDDIWAPAARAMPPPGRDGWLLRSLPRERLPALRAELTGWLVAE
RQAYPRHYVPMEGQDFDDWWQGFSSRTRSTLSRKARRLADHCGGGVSVRCYRTADEIAEFMGIAAALSAQTYQARLMQAG
LPAAEADRAYAVAAAAEDRVRAFLLFAGERAIAYLYLPVERDILIYAHPGYDPAFAALSPGSVLHVEAMRALFAEGRFRA
FDFTEGDGAHKAQFGRASVDCADILVLRPTLRNRAALGLMKGVDRLAGAGKYLLDRLGLRAKAKALIRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33910; Mature: 33779

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGGSGEVGERVALRIEVAGRTLGHVRRELAVVAHGLDDIWAPAARAMPPPGRDGWLLR
CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCHHHHHCCHHHCCCCCCCCCHHHH
SLPRERLPALRAELTGWLVAERQAYPRHYVPMEGQDFDDWWQGFSSRTRSTLSRKARRLA
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DHCGGGVSVRCYRTADEIAEFMGIAAALSAQTYQARLMQAGLPAAEADRAYAVAAAAEDR
HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH
VRAFLLFAGERAIAYLYLPVERDILIYAHPGYDPAFAALSPGSVLHVEAMRALFAEGRFR
HEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCHHCCCCCCEEHHHHHHHHHHCCCEE
AFDFTEGDGAHKAQFGRASVDCADILVLRPTLRNRAALGLMKGVDRLAGAGKYLLDRLGL
EEECCCCCCCCHHHCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RAKAKALIRR
HHHHHHHHCC
>Mature Secondary Structure 
TGGGSGEVGERVALRIEVAGRTLGHVRRELAVVAHGLDDIWAPAARAMPPPGRDGWLLR
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCHHHHHCCHHHCCCCCCCCCHHHH
SLPRERLPALRAELTGWLVAERQAYPRHYVPMEGQDFDDWWQGFSSRTRSTLSRKARRLA
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DHCGGGVSVRCYRTADEIAEFMGIAAALSAQTYQARLMQAGLPAAEADRAYAVAAAAEDR
HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH
VRAFLLFAGERAIAYLYLPVERDILIYAHPGYDPAFAALSPGSVLHVEAMRALFAEGRFR
HEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCHHCCCCCCEEHHHHHHHHHHCCCEE
AFDFTEGDGAHKAQFGRASVDCADILVLRPTLRNRAALGLMKGVDRLAGAGKYLLDRLGL
EEECCCCCCCCHHHCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RAKAKALIRR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA