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The map label for this gene is yadH [H]

Identifier: 103486982

GI number: 103486982

Start: 1560148

End: 1560915

Strand: Reverse

Name: yadH [H]

Synonym: Sala_1497

Alternate gene names: 103486982

Gene position: 1560915-1560148 (Counterclockwise)

Preceding gene: 103486983

Following gene: 103486977

Centisome position: 46.66

GC content: 59.24

Gene sequence:

>768_bases
ATGATTTCCAACCTTCGCGGCATCCGCGCCATCTATCTGTTCGAAATGGCGCGCTTCGGGCGCACCTTCTGGACCAGCCT
GATGCTGCCCGTCATCACGACGGCGCTCTATTTCGTCGTTTTCGGTTCGGCGATCGGCGGCCGCATGGCGGAGGTCGGCG
GGGTGCCCTATGGTGCCTTCATCGTGCCGGGGCTGATGATGCTGACGATGTTCACCGAAAGCATCAGCAACGCCTCCTTC
GGCATCTATATGCCCAAATGGACGGGCACGATCTATGAAATGCTGTCGGCGCCGCTGTCGCCGCTTGAAACGGTGATCGC
CTATGTCGGCGCGGCGGCGACCAAATCGGTGATCATCGGATCGATCATATTCGCTACGGCGCACCTGTTCGTCGATGTTC
AGGTCGCCCATCCGCTGCTCATGATCCTCTTCATGATCCTGATGGCGGTGACCTTCTGCCTCTTTGGCTTCATCATCGGC
GTGTGGGCGCAAAGTTTCGAGCAGTTGCAGGTGATCCCGCTGCTCATTGTCTATCCGCTGACCTTTCTCGGCGGTGCCTT
TTATTCGCTCGACATGCTGCCCGCCGCGTGGCGGACGGTGACGCTGTTCAACCCCGTCGTCTATCTGATCAGCGGCTTTC
GCTGGACCTTTTTCGGCCAGGGCGACGTCGCGATCGAGGTGAGCATGGGAGCGGTGGCGCTTTTCTTCACGCTGTGCCTG
GCGGTTATCTTCTGGATGTTCCGGACTGGCTACCGGCTCAAGAATTGA

Upstream 100 bases:

>100_bases
TCGGCGTCGGTTTCAAGGACCTGCATACAAAGCAAAGCTCGCTCGAGGATATTTTCGTCGGGCTGGTGCGAGAGGATAAG
GGCGCGAGGGAGGCGACCGC

Downstream 100 bases:

>100_bases
GGTTTCGATAGCGTCATTGCGAGCGCAGCGAAGCAATCTCCGGTTCGATAGCTGGAGATTGCTTCGCTGCGCTCGCAATG
ACGATGTTTGGGATAGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MISNLRGIRAIYLFEMARFGRTFWTSLMLPVITTALYFVVFGSAIGGRMAEVGGVPYGAFIVPGLMMLTMFTESISNASF
GIYMPKWTGTIYEMLSAPLSPLETVIAYVGAAATKSVIIGSIIFATAHLFVDVQVAHPLLMILFMILMAVTFCLFGFIIG
VWAQSFEQLQVIPLLIVYPLTFLGGAFYSLDMLPAAWRTVTLFNPVVYLISGFRWTFFGQGDVAIEVSMGAVALFFTLCL
AVIFWMFRTGYRLKN

Sequences:

>Translated_255_residues
MISNLRGIRAIYLFEMARFGRTFWTSLMLPVITTALYFVVFGSAIGGRMAEVGGVPYGAFIVPGLMMLTMFTESISNASF
GIYMPKWTGTIYEMLSAPLSPLETVIAYVGAAATKSVIIGSIIFATAHLFVDVQVAHPLLMILFMILMAVTFCLFGFIIG
VWAQSFEQLQVIPLLIVYPLTFLGGAFYSLDMLPAAWRTVTLFNPVVYLISGFRWTFFGQGDVAIEVSMGAVALFFTLCL
AVIFWMFRTGYRLKN
>Mature_255_residues
MISNLRGIRAIYLFEMARFGRTFWTSLMLPVITTALYFVVFGSAIGGRMAEVGGVPYGAFIVPGLMMLTMFTESISNASF
GIYMPKWTGTIYEMLSAPLSPLETVIAYVGAAATKSVIIGSIIFATAHLFVDVQVAHPLLMILFMILMAVTFCLFGFIIG
VWAQSFEQLQVIPLLIVYPLTFLGGAFYSLDMLPAAWRTVTLFNPVVYLISGFRWTFFGQGDVAIEVSMGAVALFFTLCL
AVIFWMFRTGYRLKN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=35.7429718875502, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28264; Mature: 28264

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]