Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486973

Identifier: 103486973

GI number: 103486973

Start: 1552390

End: 1552992

Strand: Reverse

Name: 103486973

Synonym: Sala_1488

Alternate gene names: NA

Gene position: 1552992-1552390 (Counterclockwise)

Preceding gene: 103486974

Following gene: 103486971

Centisome position: 46.42

GC content: 60.03

Gene sequence:

>603_bases
ATGACCGATATCACGCGTGACCATGCGCGTTTCCGCTCGATGATCGACGGGACGCAGGAAGACTGGGACATCATCGCGCG
CGAGCAGAAAGCCTTTGCGCCGCAGAATGGCAGACGCATTCTCGACCATCTGAAGCTGCTCGGCGGCGATTATGGCGGCT
TTCCGGTGGACCGGCTGGAACATTGTCTGCAAACCGCGACGCGCGCGCATCGGGACGGCCGCGACGAGGAATATGTCGTG
ATGGCGCTGCTCCACGATATCGGCGACACGCTGGGCGCGTTCAATCACCCCGACGTCGCGGCGGCGATCCTGAAGCCCTT
TCTGACCGAGGAAAATCTGTGGATCGTCCAGCACCACGGCATCTTCCAGGGCCATTATTTCTTCCACTATCTCGGGCTCG
ACCGCGACATGCGCGACCAGTTCAAGGATAGCCCTTATTACGATGCGTGCGCCGAGTTCTGCGAGAAATATGACGCGCCG
GCGTTCGACCCCGATTACGACAGCGAGCCGCTCGAGTTCTTCGAGCCGATGGTGATGCGGATCTGCTCCTATCCGAAAAG
CAGCATCTACAAGAAGGTGATGACCGCGGAAGCGGCGGAGTAG

Upstream 100 bases:

>100_bases
TGAAATATGGTGTGACCTACGCGCCCGAGTGATGCGCTTTGCATAGCGTTGCAAACCGAAACGAATAACGTAGACTGGCG
GCCAACAAGGAGAGGCTGCC

Downstream 100 bases:

>100_bases
TTCAGGTAAAGTGCGGCAACAGGAACCTGCTCGCATCGAGCGCATCGAGCGAGGTCGAGATGCCAATCGGCTTTGCGCTT
GCCTTCGGGGTGTCTCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase HD Subdomain; Metal-Dependent Phosphohydrolase; HD Domain Protein; Phosphohydrolase; Phosphohydrolase Family Protein; HD Phosphohydrolase-Like Protein; Metal-Dependent Phosphohydrolase HD Subdomain Protein

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTDITRDHARFRSMIDGTQEDWDIIAREQKAFAPQNGRRILDHLKLLGGDYGGFPVDRLEHCLQTATRAHRDGRDEEYVV
MALLHDIGDTLGAFNHPDVAAAILKPFLTEENLWIVQHHGIFQGHYFFHYLGLDRDMRDQFKDSPYYDACAEFCEKYDAP
AFDPDYDSEPLEFFEPMVMRICSYPKSSIYKKVMTAEAAE

Sequences:

>Translated_200_residues
MTDITRDHARFRSMIDGTQEDWDIIAREQKAFAPQNGRRILDHLKLLGGDYGGFPVDRLEHCLQTATRAHRDGRDEEYVV
MALLHDIGDTLGAFNHPDVAAAILKPFLTEENLWIVQHHGIFQGHYFFHYLGLDRDMRDQFKDSPYYDACAEFCEKYDAP
AFDPDYDSEPLEFFEPMVMRICSYPKSSIYKKVMTAEAAE
>Mature_199_residues
TDITRDHARFRSMIDGTQEDWDIIAREQKAFAPQNGRRILDHLKLLGGDYGGFPVDRLEHCLQTATRAHRDGRDEEYVVM
ALLHDIGDTLGAFNHPDVAAAILKPFLTEENLWIVQHHGIFQGHYFFHYLGLDRDMRDQFKDSPYYDACAEFCEKYDAPA
FDPDYDSEPLEFFEPMVMRICSYPKSSIYKKVMTAEAAE

Specific function: Unknown

COG id: COG4341

COG function: function code R; Predicted HD phosphohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23175; Mature: 23044

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDITRDHARFRSMIDGTQEDWDIIAREQKAFAPQNGRRILDHLKLLGGDYGGFPVDRLE
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
HCLQTATRAHRDGRDEEYVVMALLHDIGDTLGAFNHPDVAAAILKPFLTEENLWIVQHHG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECC
IFQGHYFFHYLGLDRDMRDQFKDSPYYDACAEFCEKYDAPAFDPDYDSEPLEFFEPMVMR
EEEHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ICSYPKSSIYKKVMTAEAAE
HHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDITRDHARFRSMIDGTQEDWDIIAREQKAFAPQNGRRILDHLKLLGGDYGGFPVDRLE
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
HCLQTATRAHRDGRDEEYVVMALLHDIGDTLGAFNHPDVAAAILKPFLTEENLWIVQHHG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECC
IFQGHYFFHYLGLDRDMRDQFKDSPYYDACAEFCEKYDAPAFDPDYDSEPLEFFEPMVMR
EEEHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ICSYPKSSIYKKVMTAEAAE
HHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA