Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486915

Identifier: 103486915

GI number: 103486915

Start: 1479903

End: 1480130

Strand: Reverse

Name: 103486915

Synonym: Sala_1429

Alternate gene names: NA

Gene position: 1480130-1479903 (Counterclockwise)

Preceding gene: 103486920

Following gene: 103486914

Centisome position: 44.25

GC content: 58.77

Gene sequence:

>228_bases
ATGGCCATGCTCAACATCGCATCGCTCATCATTGGTGTTATCGCGTTGATTCTCGCGGTTTTTGCGTTCATTCCCCTGCT
TGGCTGGGCCAATTGGGTGATCGTGCCGTTCGCGGTCATCGGCCTCGCGCTCGGCGCCATGTCGGACAAGACGAGCGGGC
GGAACCTCAATATCGTCGTCGTCATCATCGGCGTCATCCGCCTGATGCTGGGCGGCGGCATCTTCTAA

Upstream 100 bases:

>100_bases
CCGAATCCTGTTGCATGAACCTTGGGCAACAAGATGAATCGAGCGTATCGGTCGACGAACCGAATGCCCCTTGCCGCATC
GGCGGCGGCGTGCGAGAACC

Downstream 100 bases:

>100_bases
GTCACTAGGGTCAGGACCCATTAATTCCCCGTTCGAGGTTTGAAGCGATTTTGCTCAGGGCGAGGAGAAAAGGCGCGGGA
ATATGGATATATTTCAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MAMLNIASLIIGVIALILAVFAFIPLLGWANWVIVPFAVIGLALGAMSDKTSGRNLNIVVVIIGVIRLMLGGGIF

Sequences:

>Translated_75_residues
MAMLNIASLIIGVIALILAVFAFIPLLGWANWVIVPFAVIGLALGAMSDKTSGRNLNIVVVIIGVIRLMLGGGIF
>Mature_74_residues
AMLNIASLIIGVIALILAVFAFIPLLGWANWVIVPFAVIGLALGAMSDKTSGRNLNIVVVIIGVIRLMLGGGIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7834; Mature: 7703

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLNIASLIIGVIALILAVFAFIPLLGWANWVIVPFAVIGLALGAMSDKTSGRNLNIVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VIIGVIRLMLGGGIF
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMLNIASLIIGVIALILAVFAFIPLLGWANWVIVPFAVIGLALGAMSDKTSGRNLNIVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VIIGVIRLMLGGGIF
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA