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The map label for this gene is ygeA [H]

Identifier: 103486866

GI number: 103486866

Start: 1435897

End: 1436595

Strand: Reverse

Name: ygeA [H]

Synonym: Sala_1380

Alternate gene names: 103486866

Gene position: 1436595-1435897 (Counterclockwise)

Preceding gene: 103486867

Following gene: 103486864

Centisome position: 42.95

GC content: 62.23

Gene sequence:

>699_bases
ATGCGCAAAATCGGCCTGATCGGCGGCATGAGCTGGGCGTCGACCGAGCTTTATTACCGCCATCTCAACAAGGGCGTGCA
GAAGCGCCTCGGCACCGGCTGTTCGGCGCCGATTCTGATGGAAAGCCTGAACTATTGCGACCTGTCGCGGATCACCACCG
ATGAACAATGGGCGCATGCCAAAGAGGTGTTGATCGGGTCGGCGCAGCGGCTGGAGGCGGCGGGCGCGACCGCGCTGATG
ATTGCCGCCAATTCGATGCACAAGGTCGCCGAGGATGTTGCGGCGGCCATCTCGATCCCGCTCATCCACATCGTCGACGA
AACCGGCGAGAAGATGAAGGCCGACGGGGTCAAGGCGGCGGCGGTGATCGGCACGCGCAACGTGATGACCGAGGCGTGGT
TTCGCCAGCGGCTCGTGCGCCACGGGCTGACGCTTGCGCCCTATGACGCGACGCGCGCCGACGAAATCGACCGGATCATC
TACGAAGAGCTGATGCTGGGCAAGGTCAACGAAGCCTCGCGGCGCACGATGAAAACCTTTATCACCGACATCGCCAAACA
GGATATTCAGGCGATCGTCCTTGCCTGTACCGAGCTGGTGATGCTCGTCGATCCCGACGCCAATCTTCTGCCGATCTATG
ACACGACGCGGATTCACGTCGCGGCGGGGGTGGATTGGGTTTTGGGCGAGGGGGCGTAA

Upstream 100 bases:

>100_bases
CGTCATCCCGGCGAAGGCCGGGATCTCGACCTCGCGTTGGATAGCAACGTCGAGACCCCGGCCTTCGCCGGGGTGACGAT
AAAAGGGGCATGGATTCGTT

Downstream 100 bases:

>100_bases
GCCCCTTATTTCCGCTCGCATCGAGCGAAGTCGAGATGCCCCTCCGGCTAGGCGCCCGTTCGTTGGGTGTCTCGACTTCG
CTCGACACGAACGGAACGAG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRKIGLIGGMSWASTELYYRHLNKGVQKRLGTGCSAPILMESLNYCDLSRITTDEQWAHAKEVLIGSAQRLEAAGATALM
IAANSMHKVAEDVAAAISIPLIHIVDETGEKMKADGVKAAAVIGTRNVMTEAWFRQRLVRHGLTLAPYDATRADEIDRII
YEELMLGKVNEASRRTMKTFITDIAKQDIQAIVLACTELVMLVDPDANLLPIYDTTRIHVAAGVDWVLGEGA

Sequences:

>Translated_232_residues
MRKIGLIGGMSWASTELYYRHLNKGVQKRLGTGCSAPILMESLNYCDLSRITTDEQWAHAKEVLIGSAQRLEAAGATALM
IAANSMHKVAEDVAAAISIPLIHIVDETGEKMKADGVKAAAVIGTRNVMTEAWFRQRLVRHGLTLAPYDATRADEIDRII
YEELMLGKVNEASRRTMKTFITDIAKQDIQAIVLACTELVMLVDPDANLLPIYDTTRIHVAAGVDWVLGEGA
>Mature_232_residues
MRKIGLIGGMSWASTELYYRHLNKGVQKRLGTGCSAPILMESLNYCDLSRITTDEQWAHAKEVLIGSAQRLEAAGATALM
IAANSMHKVAEDVAAAISIPLIHIVDETGEKMKADGVKAAAVIGTRNVMTEAWFRQRLVRHGLTLAPYDATRADEIDRII
YEELMLGKVNEASRRTMKTFITDIAKQDIQAIVLACTELVMLVDPDANLLPIYDTTRIHVAAGVDWVLGEGA

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=36.5217391304348, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25421; Mature: 25421

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIGLIGGMSWASTELYYRHLNKGVQKRLGTGCSAPILMESLNYCDLSRITTDEQWAHA
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCCHHHHHH
KEVLIGSAQRLEAAGATALMIAANSMHKVAEDVAAAISIPLIHIVDETGEKMKADGVKAA
HHHHHCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCHHH
AVIGTRNVMTEAWFRQRLVRHGLTLAPYDATRADEIDRIIYEELMLGKVNEASRRTMKTF
HHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ITDIAKQDIQAIVLACTELVMLVDPDANLLPIYDTTRIHVAAGVDWVLGEGA
HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEECCEEECCCCC
>Mature Secondary Structure
MRKIGLIGGMSWASTELYYRHLNKGVQKRLGTGCSAPILMESLNYCDLSRITTDEQWAHA
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCCHHHHHH
KEVLIGSAQRLEAAGATALMIAANSMHKVAEDVAAAISIPLIHIVDETGEKMKADGVKAA
HHHHHCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCHHH
AVIGTRNVMTEAWFRQRLVRHGLTLAPYDATRADEIDRIIYEELMLGKVNEASRRTMKTF
HHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ITDIAKQDIQAIVLACTELVMLVDPDANLLPIYDTTRIHVAAGVDWVLGEGA
HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]