| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486851
Identifier: 103486851
GI number: 103486851
Start: 1421417
End: 1422304
Strand: Reverse
Name: 103486851
Synonym: Sala_1365
Alternate gene names: NA
Gene position: 1422304-1421417 (Counterclockwise)
Preceding gene: 103486852
Following gene: 103486847
Centisome position: 42.52
GC content: 65.77
Gene sequence:
>888_bases ATGCCCACAAGGAGAAACCCCATGTGCACCGAAAAGATGGAAGCCGATCGAGACCGTGCGGGAATGCCCGTCGCACGCCG CAGCTTTGCGGCACTTGCGGGCGCGGGTGCATTGATGGCGGCGCTGCCCGCGCGCGCCATCGCGGGCAAGCCGGTGAAGG GCCGCGATGTCTCGATCACGACGGCCGACGGTATCTGCGACGCTTATTTTGTGGCGCCCACCGAGGACAAGCATCCCGGC GTGATTGTGTGGCCCGACATCCGCGGCCTGCGCCCGGCCTTTCGCCAGATGGCCGAGCGGCTGGCGGGCGACGGCTATGC AGTGCTGTGCGTCAATCCCTTTTATCGCTGGCAGAAGGCGCCCGTGGTGGACGCCGAAAATCATTGGGGTGTCGCCGCGG TGCGGGAAAAATTGTTCGGCTATCTGAAGCAATTGTCGCGGCCGCTGGTCGAAACCGACGCCGCGGCACATCTTGCCTTC CTCGACGCGCAAGGCGAGGTCGATACGGCGCGCGGGATCGGGACCAGCGGCTATTGCATGGGCGGGCCGATGACGATCTA TACCGCGGCGCTGAAGCCCGGTCGCGTGCGCGCGGCGGCGAGCTTTCACGGCGCCAGCGTCGCCACCGACAAGCCCGACA GCCCGCATCTGCTGATCCCTGCAAGCAAGGCCGGCTATCTGTTCGCGATCGCCGAGGATGACGACAAGGAAAGCCCGAAC GAGAAGGTCTTGCTGAAATCGGTGCTTGAACCGCGGCCAGAGTGGCACGAGGTCGAGGTCTATCCGGCGCAGCACGGCTG GTGCCCGCCCGACGGGCGCGTCTATGACGAAGCGGCGGCGGAGAAGGCGTGGAGCCGCCAACTCGCGCTGTTCAAGGCGA GTTTGTAA
Upstream 100 bases:
>100_bases CAATGCAATGTCGGACTAGCCTTGCGCCCGTTTGATCCCGAAGGCGGGACGACAATGGGAATCGCGAGGAAAGTTGCACC GCTTTCCGGGATTTTCCGAA
Downstream 100 bases:
>100_bases AGTTTCGCTTTGAAAACATATTGTCGTCCCGGCGAAGGCCGGGTTGACAAAAAGGCTCAGTGCGCGTGTGCGCCGCCGCT TGCGGCATAGCTCGCGTAGA
Product: dienelactone hydrolase
Products: NA
Alternate protein names: Carboxymethylenebutenolidase; Hydrolase; Alanine Rich Hydrolase; Dienelactone Hydrolase Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Dienelactone Hydrolase Family; Arboxymethylenebutenolidase; Dienelactone Hydrolase Or ; Dienelactone Hydrolase Protein; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Domain Protein
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPTRRNPMCTEKMEADRDRAGMPVARRSFAALAGAGALMAALPARAIAGKPVKGRDVSITTADGICDAYFVAPTEDKHPG VIVWPDIRGLRPAFRQMAERLAGDGYAVLCVNPFYRWQKAPVVDAENHWGVAAVREKLFGYLKQLSRPLVETDAAAHLAF LDAQGEVDTARGIGTSGYCMGGPMTIYTAALKPGRVRAAASFHGASVATDKPDSPHLLIPASKAGYLFAIAEDDDKESPN EKVLLKSVLEPRPEWHEVEVYPAQHGWCPPDGRVYDEAAAEKAWSRQLALFKASL
Sequences:
>Translated_295_residues MPTRRNPMCTEKMEADRDRAGMPVARRSFAALAGAGALMAALPARAIAGKPVKGRDVSITTADGICDAYFVAPTEDKHPG VIVWPDIRGLRPAFRQMAERLAGDGYAVLCVNPFYRWQKAPVVDAENHWGVAAVREKLFGYLKQLSRPLVETDAAAHLAF LDAQGEVDTARGIGTSGYCMGGPMTIYTAALKPGRVRAAASFHGASVATDKPDSPHLLIPASKAGYLFAIAEDDDKESPN EKVLLKSVLEPRPEWHEVEVYPAQHGWCPPDGRVYDEAAAEKAWSRQLALFKASL >Mature_294_residues PTRRNPMCTEKMEADRDRAGMPVARRSFAALAGAGALMAALPARAIAGKPVKGRDVSITTADGICDAYFVAPTEDKHPGV IVWPDIRGLRPAFRQMAERLAGDGYAVLCVNPFYRWQKAPVVDAENHWGVAAVREKLFGYLKQLSRPLVETDAAAHLAFL DAQGEVDTARGIGTSGYCMGGPMTIYTAALKPGRVRAAASFHGASVATDKPDSPHLLIPASKAGYLFAIAEDDDKESPNE KVLLKSVLEPRPEWHEVEVYPAQHGWCPPDGRVYDEAAAEKAWSRQLALFKASL
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31968; Mature: 31837
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRRNPMCTEKMEADRDRAGMPVARRSFAALAGAGALMAALPARAIAGKPVKGRDVSIT CCCCCCCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TADGICDAYFVAPTEDKHPGVIVWPDIRGLRPAFRQMAERLAGDGYAVLCVNPFYRWQKA ECCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCCC PVVDAENHWGVAAVREKLFGYLKQLSRPLVETDAAAHLAFLDAQGEVDTARGIGTSGYCM CEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCCHHCCCCCCCEEC GGPMTIYTAALKPGRVRAAASFHGASVATDKPDSPHLLIPASKAGYLFAIAEDDDKESPN CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC EKVLLKSVLEPRPEWHEVEVYPAQHGWCPPDGRVYDEAAAEKAWSRQLALFKASL HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTRRNPMCTEKMEADRDRAGMPVARRSFAALAGAGALMAALPARAIAGKPVKGRDVSIT CCCCCCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TADGICDAYFVAPTEDKHPGVIVWPDIRGLRPAFRQMAERLAGDGYAVLCVNPFYRWQKA ECCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCCC PVVDAENHWGVAAVREKLFGYLKQLSRPLVETDAAAHLAFLDAQGEVDTARGIGTSGYCM CEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCCHHCCCCCCCEEC GGPMTIYTAALKPGRVRAAASFHGASVATDKPDSPHLLIPASKAGYLFAIAEDDDKESPN CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC EKVLLKSVLEPRPEWHEVEVYPAQHGWCPPDGRVYDEAAAEKAWSRQLALFKASL HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA