| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is nuoG [H]
Identifier: 103486789
GI number: 103486789
Start: 1362724
End: 1364736
Strand: Reverse
Name: nuoG [H]
Synonym: Sala_1303
Alternate gene names: 103486789
Gene position: 1364736-1362724 (Counterclockwise)
Preceding gene: 103486790
Following gene: 103486788
Centisome position: 40.8
GC content: 65.67
Gene sequence:
>2013_bases ATGCCTAAAGTTACCGTAGATGGCGTAGAACTCGACGTTCCGCAGGGCGCGACCGTTCTGCAGGCGTGCGAGCTGGCGGG GAAGGAAATTCCGCGCTTCTGCTATCATGAGCGCCTGTCGATCGCCGGCAACTGCCGCATGTGCCTCGTCGAGGTCGCCC CCGGCCCGCCGAAACCGCAGGCATCGTGCGCGCTGCCGACCGCCGAGGGCCAGATCATCAAGACCGACAGCCCGATGGTC AAGAAGGCGCGCGAAGGGGTGATGGAGTTCCTGCTCATCAACCACCCGCTCGACTGCCCGATCTGCGACCAGGGCGGCGA ATGCGACTTGCAGGACCAGTCGATCGCCTATGGCCGCGGCGCGACGCGCTATGACGAGAACAAGCGCGCGGTGACCGAAA AATATATGGGGCCGATCGTCAAGACGGTGATGACCCGCTGTATCCAGTGCACGCGCTGCGTCCGCTTTGCGGAGGAAGTC GCGGGTGTTGAGGATATCGGCGCGATCTATCGCGGCGAAAATATGCAGATCACGACCTATCTGGAACATGCGATCCAGAG CGAACTCAGCGGCAACGTGGTCGACCTCTGCCCGGTCGGCGCGCTGACCAGCAAACCCTATGCGTTCGAGGCGCGGCCGT GGGAGCTGACCAAGACGCTCGGCATCGACATGATGGACGCGGTCGGCACCAATGTGCGTATCGACAGCCGCGGGCGGCAG GTGCTGCGCGTGCTGCCGCGCGTCAACGACGATGTGAACGAGGAATGGGCGAGCGACAAGACGCGCCACCATGTCGACGG CCTCGTTCGCCGCCGCCTCGACCGGCCTTTTGTCCGCAAGGACGGCCAGCTGGTCGAAGCGACCTGGGCCGAAGCATTCG AGGCGATCAAGGCGGTGAACGCCGGTTCGTCGGTCGCGGCAATCGCGGGCGACCTCGTCGATTGCGAGACGATGTTCGCG GCCAGGGCGCTGGTGAACGCGCTCGGGTCGGAGCTGCTCGAAGGGCGTCAGACGGGCCTTGACTATGACGTCACCAGCCT GTCGGCGGTCAATTTCAACACCACCATCGCCGAGGCCGAAAATGCCGACGTGATCCTGCTCGTCGGCACGAACCTGCGCT GGGAAGCGCCGCTGATCAACACGCGCGTCCGCAAGGCGGTGTGGAAAAAGGGCGCGAAGGTTTTCGCCATCGGCCCCGAA ACCGACCTGACCTACAAGACCGAGTGGCTCGGCGACGACGCCTCGCTCGTCGCGAAACCGCCCAAGCATGTTCTCGATGC GCTCAAGGGCGCCGAGCGGCCGATGCTGGTCTTCGGCGGCGGCGCCTTGTCGGTGCCGGGCGTTCACGGCGCGGGCCTCG CGCTCGCCAAGGCGGTGAATGCGGTCAAGGACGGCTGGAACGGCTTCAACGCCGTGCATGTCTCCGCGGCGCGCATGGGT TCGCTGATGCTTGGTTATGGCCTGCCCGGCGGGATCAGGGACGTGATCGCGGCGAAGCCGAAGCTGGCCTTCTTCCTCGG CGCCGACGAGGTCGATTTTGCGGCCTTCGCGGAGACGTTCAAGGTCTATGTCGGCCACCATGGCGACAACGGCGCGCATG CCGCCGACGTTATCCTGCCCGCGGCCGCGTGGACCGAAAAGGACTTCACCACGGTCAACACCGAGGGCCGCGTCCAGCGC AGCGAGAAGGCGGTGTTCGCACCGGGCGACGCGCGCGAGGACTGGAGCATTTTCCGTGCGCTCGCCGATGCGCTTGGCGT GAATGTCGGCTTCGACAGTTTCGACGAGTGCCGCGCGGCGATGATCGCGGCGGTGCCGGCGCTTGGGCAGGAAGGCCTTG CCGATTATGGCTGGACGGTGCCGAAACTGCCCGCGAAGCCCGAGGCGCGGGCGATCCCGTCGCCGATCAAGGATTTCTAC CTCACCAACGCCATCTGCCGCGCGTCGCCGACGATGCAGCGCTGCTCGGAAGAGCTGATCCATGGTGTGGCGTTTGCGGA GGCGGCGGAATGA
Upstream 100 bases:
>100_bases TAGTCTTTTCCAGATCTGCTCTTCGAGGCGTGATTGGGGAAGTTCTTTATCGGCTATCGGTAGCTGCAAGTCAGCCGACG ATAGCAGCCAAGGACTGACG
Downstream 100 bases:
>100_bases GCGCGGCTGTATATTTCAGCCCTTCTCCCCTTGCGGGAGAAGGATACGAAGCCTTGCCGCTGCAAGCGGCCAGGCGCAGT TGGATGAGGGGTTGCGCGCC
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I subunit G; NDH-1 subunit G [H]
Number of amino acids: Translated: 670; Mature: 669
Protein sequence:
>670_residues MPKVTVDGVELDVPQGATVLQACELAGKEIPRFCYHERLSIAGNCRMCLVEVAPGPPKPQASCALPTAEGQIIKTDSPMV KKAREGVMEFLLINHPLDCPICDQGGECDLQDQSIAYGRGATRYDENKRAVTEKYMGPIVKTVMTRCIQCTRCVRFAEEV AGVEDIGAIYRGENMQITTYLEHAIQSELSGNVVDLCPVGALTSKPYAFEARPWELTKTLGIDMMDAVGTNVRIDSRGRQ VLRVLPRVNDDVNEEWASDKTRHHVDGLVRRRLDRPFVRKDGQLVEATWAEAFEAIKAVNAGSSVAAIAGDLVDCETMFA ARALVNALGSELLEGRQTGLDYDVTSLSAVNFNTTIAEAENADVILLVGTNLRWEAPLINTRVRKAVWKKGAKVFAIGPE TDLTYKTEWLGDDASLVAKPPKHVLDALKGAERPMLVFGGGALSVPGVHGAGLALAKAVNAVKDGWNGFNAVHVSAARMG SLMLGYGLPGGIRDVIAAKPKLAFFLGADEVDFAAFAETFKVYVGHHGDNGAHAADVILPAAAWTEKDFTTVNTEGRVQR SEKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAAMIAAVPALGQEGLADYGWTVPKLPAKPEARAIPSPIKDFY LTNAICRASPTMQRCSEELIHGVAFAEAAE
Sequences:
>Translated_670_residues MPKVTVDGVELDVPQGATVLQACELAGKEIPRFCYHERLSIAGNCRMCLVEVAPGPPKPQASCALPTAEGQIIKTDSPMV KKAREGVMEFLLINHPLDCPICDQGGECDLQDQSIAYGRGATRYDENKRAVTEKYMGPIVKTVMTRCIQCTRCVRFAEEV AGVEDIGAIYRGENMQITTYLEHAIQSELSGNVVDLCPVGALTSKPYAFEARPWELTKTLGIDMMDAVGTNVRIDSRGRQ VLRVLPRVNDDVNEEWASDKTRHHVDGLVRRRLDRPFVRKDGQLVEATWAEAFEAIKAVNAGSSVAAIAGDLVDCETMFA ARALVNALGSELLEGRQTGLDYDVTSLSAVNFNTTIAEAENADVILLVGTNLRWEAPLINTRVRKAVWKKGAKVFAIGPE TDLTYKTEWLGDDASLVAKPPKHVLDALKGAERPMLVFGGGALSVPGVHGAGLALAKAVNAVKDGWNGFNAVHVSAARMG SLMLGYGLPGGIRDVIAAKPKLAFFLGADEVDFAAFAETFKVYVGHHGDNGAHAADVILPAAAWTEKDFTTVNTEGRVQR SEKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAAMIAAVPALGQEGLADYGWTVPKLPAKPEARAIPSPIKDFY LTNAICRASPTMQRCSEELIHGVAFAEAAE >Mature_669_residues PKVTVDGVELDVPQGATVLQACELAGKEIPRFCYHERLSIAGNCRMCLVEVAPGPPKPQASCALPTAEGQIIKTDSPMVK KAREGVMEFLLINHPLDCPICDQGGECDLQDQSIAYGRGATRYDENKRAVTEKYMGPIVKTVMTRCIQCTRCVRFAEEVA GVEDIGAIYRGENMQITTYLEHAIQSELSGNVVDLCPVGALTSKPYAFEARPWELTKTLGIDMMDAVGTNVRIDSRGRQV LRVLPRVNDDVNEEWASDKTRHHVDGLVRRRLDRPFVRKDGQLVEATWAEAFEAIKAVNAGSSVAAIAGDLVDCETMFAA RALVNALGSELLEGRQTGLDYDVTSLSAVNFNTTIAEAENADVILLVGTNLRWEAPLINTRVRKAVWKKGAKVFAIGPET DLTYKTEWLGDDASLVAKPPKHVLDALKGAERPMLVFGGGALSVPGVHGAGLALAKAVNAVKDGWNGFNAVHVSAARMGS LMLGYGLPGGIRDVIAAKPKLAFFLGADEVDFAAFAETFKVYVGHHGDNGAHAADVILPAAAWTEKDFTTVNTEGRVQRS EKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAAMIAAVPALGQEGLADYGWTVPKLPAKPEARAIPSPIKDFYL TNAICRASPTMQRCSEELIHGVAFAEAAE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=704, Percent_Identity=47.5852272727273, Blast_Score=601, Evalue=1e-172, Organism=Escherichia coli, GI145693161, Length=686, Percent_Identity=26.6763848396501, Blast_Score=205, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17565758, Length=694, Percent_Identity=45.2449567723343, Blast_Score=536, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32566231, Length=605, Percent_Identity=48.099173553719, Blast_Score=504, Evalue=1e-143, Organism=Caenorhabditis elegans, GI193209088, Length=252, Percent_Identity=61.5079365079365, Blast_Score=327, Evalue=9e-90, Organism=Drosophila melanogaster, GI24640559, Length=675, Percent_Identity=47.8518518518518, Blast_Score=590, Evalue=1e-168, Organism=Drosophila melanogaster, GI24640557, Length=675, Percent_Identity=47.8518518518518, Blast_Score=590, Evalue=1e-168,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 72238; Mature: 72107
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00641 COMPLEX1_75K_1 ; PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVTVDGVELDVPQGATVLQACELAGKEIPRFCYHERLSIAGNCRMCLVEVAPGPPKPQ CCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC ASCALPTAEGQIIKTDSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQSIAYGRG CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC ATRYDENKRAVTEKYMGPIVKTVMTRCIQCTRCVRFAEEVAGVEDIGAIYRGENMQITTY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEHHH LEHAIQSELSGNVVDLCPVGALTSKPYAFEARPWELTKTLGIDMMDAVGTNVRIDSRGRQ HHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCHHHHHHCCHHHHHCCCCEEECCHHHH VLRVLPRVNDDVNEEWASDKTRHHVDGLVRRRLDRPFVRKDGQLVEATWAEAFEAIKAVN HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHC AGSSVAAIAGDLVDCETMFAARALVNALGSELLEGRQTGLDYDVTSLSAVNFNTTIAEAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCC NADVILLVGTNLRWEAPLINTRVRKAVWKKGAKVFAIGPETDLTYKTEWLGDDASLVAKP CCCEEEEECCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEECCC PKHVLDALKGAERPMLVFGGGALSVPGVHGAGLALAKAVNAVKDGWNGFNAVHVSAARMG HHHHHHHHCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHC SLMLGYGLPGGIRDVIAAKPKLAFFLGADEVDFAAFAETFKVYVGHHGDNGAHAADVILP CCCEECCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCHHHHEEE AAAWTEKDFTTVNTEGRVQRSEKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAA CHHCCCCCCEEECCCCCEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH MIAAVPALGQEGLADYGWTVPKLPAKPEARAIPSPIKDFYLTNAICRASPTMQRCSEELI HHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH HGVAFAEAAE HHHHHHHCCC >Mature Secondary Structure PKVTVDGVELDVPQGATVLQACELAGKEIPRFCYHERLSIAGNCRMCLVEVAPGPPKPQ CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC ASCALPTAEGQIIKTDSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQSIAYGRG CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC ATRYDENKRAVTEKYMGPIVKTVMTRCIQCTRCVRFAEEVAGVEDIGAIYRGENMQITTY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEHHH LEHAIQSELSGNVVDLCPVGALTSKPYAFEARPWELTKTLGIDMMDAVGTNVRIDSRGRQ HHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCHHHHHHCCHHHHHCCCCEEECCHHHH VLRVLPRVNDDVNEEWASDKTRHHVDGLVRRRLDRPFVRKDGQLVEATWAEAFEAIKAVN HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHC AGSSVAAIAGDLVDCETMFAARALVNALGSELLEGRQTGLDYDVTSLSAVNFNTTIAEAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCC NADVILLVGTNLRWEAPLINTRVRKAVWKKGAKVFAIGPETDLTYKTEWLGDDASLVAKP CCCEEEEECCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEECCC PKHVLDALKGAERPMLVFGGGALSVPGVHGAGLALAKAVNAVKDGWNGFNAVHVSAARMG HHHHHHHHCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHC SLMLGYGLPGGIRDVIAAKPKLAFFLGADEVDFAAFAETFKVYVGHHGDNGAHAADVILP CCCEECCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCHHHHEEE AAAWTEKDFTTVNTEGRVQRSEKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAA CHHCCCCCCEEECCCCCEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH MIAAVPALGQEGLADYGWTVPKLPAKPEARAIPSPIKDFYLTNAICRASPTMQRCSEELI HHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH HGVAFAEAAE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA