| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nuoK
Identifier: 103486785
GI number: 103486785
Start: 1359915
End: 1360220
Strand: Reverse
Name: nuoK
Synonym: Sala_1299
Alternate gene names: 103486785
Gene position: 1360220-1359915 (Counterclockwise)
Preceding gene: 103486786
Following gene: 103486784
Centisome position: 40.66
GC content: 58.82
Gene sequence:
>306_bases ATGATTTCGGTCGGCCATTATCTCGCCGTTTCGGCGGTGCTGTTCACGCTCGGCGTGCTCGGCATCTTCATCAACCGCAA GAATATCATCGTCATTTTGATGGCGATCGAGCTCATTCTGCTTGCGGTGAACATCAACCTCGTCGCGTTCAGCGCGGCGC TGGGCGATCTGGTCGGGCAGGTGTTTTCGATGTTCGTGCTGACCGTCGCCGCGGGCGAAGCGGCGATCGGTCTGGCCATC CTTGTTATCTATTTCCGCGGCCGCGGCACCATTGCCGTCGACGATGCCAACCGGATGAAGGGGTAA
Upstream 100 bases:
>100_bases CGAGCGAAGTCGAGATGCCCATCGTTCGTACAAGCCCTCGTGGTGTCTCGACTTCGCTCGACACGAACGGAATTCAAGGT GACAGCACGGGAGTGGCTGC
Downstream 100 bases:
>100_bases GCCGGTGATTCAGGCGATCGTTTTCCTGCCGCTGCTCGCGGCGCTTGTTGCAGGGCTTGGCCAGCGCGCCATCGGCCCCT TCGCATCGAAGCTGGTCACG
Product: NADH-ubiquinone oxidoreductase, chain 4L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit K; NDH-1 subunit K
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MISVGHYLAVSAVLFTLGVLGIFINRKNIIVILMAIELILLAVNINLVAFSAALGDLVGQVFSMFVLTVAAGEAAIGLAI LVIYFRGRGTIAVDDANRMKG
Sequences:
>Translated_101_residues MISVGHYLAVSAVLFTLGVLGIFINRKNIIVILMAIELILLAVNINLVAFSAALGDLVGQVFSMFVLTVAAGEAAIGLAI LVIYFRGRGTIAVDDANRMKG >Mature_101_residues MISVGHYLAVSAVLFTLGVLGIFINRKNIIVILMAIELILLAVNINLVAFSAALGDLVGQVFSMFVLTVAAGEAAIGLAI LVIYFRGRGTIAVDDANRMKG
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0713
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 4L family
Homologues:
Organism=Escherichia coli, GI1788615, Length=101, Percent_Identity=34.6534653465347, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOK_SPHAL (Q1GTK9)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616346.1 - GeneID: 4082591 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1299 - NMPDR: fig|317655.9.peg.1235 - HOGENOM: HBG673066 - OMA: VLMSIEL - BioCyc: SALA317655:SALA_1299-MONOMER - GO: GO:0006810 - HAMAP: MF_01456 - InterPro: IPR001133 - PANTHER: PTHR11434
Pfam domain/function: PF00420 Oxidored_q2
EC number: =1.6.99.5
Molecular weight: Translated: 10634; Mature: 10634
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x125ecbc0)-; HASH(0xf53fbd0)-; HASH(0x12355824)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVGHYLAVSAVLFTLGVLGIFINRKNIIVILMAIELILLAVNINLVAFSAALGDLVGQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSMFVLTVAAGEAAIGLAILVIYFRGRGTIAVDDANRMKG HHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEECCCCCCCH >Mature Secondary Structure MISVGHYLAVSAVLFTLGVLGIFINRKNIIVILMAIELILLAVNINLVAFSAALGDLVGQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSMFVLTVAAGEAAIGLAILVIYFRGRGTIAVDDANRMKG HHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEECCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA