Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486721

Identifier: 103486721

GI number: 103486721

Start: 1283124

End: 1283579

Strand: Reverse

Name: 103486721

Synonym: Sala_1234

Alternate gene names: NA

Gene position: 1283579-1283124 (Counterclockwise)

Preceding gene: 103486726

Following gene: 103486719

Centisome position: 38.37

GC content: 69.52

Gene sequence:

>456_bases
ATGCGGACATATCTGGTGGTGATCGACGACAGCCCGGAGGCGTCGCTTGCGCTGCGCTTTGCGGCGCGGCGCGCAGCGCG
GACGGGGGGTGGCGTCATGGTGCTCGCGATCGTCCCGCCGCAGGATTTCGTGGCGTTCGGCGGGGTGCAGGCGACGATCG
AGGCTGAGGCGCGCGAACATGCCGAGGAACTGGTGGCCGCCGCCGCCGATGCGGTCGTCAAGGAAGCGGGCGTGACGCCG
CAGATCATGGTGAAATCGGGCAAACCCGTCGAGGTCGTGCGCGAAGTGATCGGCGCGAGTGACGAAATTGCCGCGCTGGT
GCTCGCGACCGCCGCCACCGGCGCGCCCGGCCCGCTGGTATCGCATTTCACCGGACAGGATGCGGGAACGCTCCCCTGTC
CGGTGATGCTGGTGCCGGGCGGGATCGACCTCGCCCGGCTCGATGCGTTGAGCTGA

Upstream 100 bases:

>100_bases
GCCATAAGCCGTGCGCCGGTCAAGGTCCAGCGGGCCAAACTTGCCTTTCATACGAATGTGACGCAGTCTCGCGCCAAGCA
TAATATCGGGGGTCGGGACG

Downstream 100 bases:

>100_bases
CCCGGCGGTCAGGCCGCGGCGACCGCTCCTGATCCCGCGACGCTTTTCCATTCGAGGATTGCGAAACCGAGCACGCCCAG
CGCCTGAACAGCCACGGCGG

Product: universal stress protein UspA and related nucleotide-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRTYLVVIDDSPEASLALRFAARRAARTGGGVMVLAIVPPQDFVAFGGVQATIEAEAREHAEELVAAAADAVVKEAGVTP
QIMVKSGKPVEVVREVIGASDEIAALVLATAATGAPGPLVSHFTGQDAGTLPCPVMLVPGGIDLARLDALS

Sequences:

>Translated_151_residues
MRTYLVVIDDSPEASLALRFAARRAARTGGGVMVLAIVPPQDFVAFGGVQATIEAEAREHAEELVAAAADAVVKEAGVTP
QIMVKSGKPVEVVREVIGASDEIAALVLATAATGAPGPLVSHFTGQDAGTLPCPVMLVPGGIDLARLDALS
>Mature_151_residues
MRTYLVVIDDSPEASLALRFAARRAARTGGGVMVLAIVPPQDFVAFGGVQATIEAEAREHAEELVAAAADAVVKEAGVTP
QIMVKSGKPVEVVREVIGASDEIAALVLATAATGAPGPLVSHFTGQDAGTLPCPVMLVPGGIDLARLDALS

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15368; Mature: 15368

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYLVVIDDSPEASLALRFAARRAARTGGGVMVLAIVPPQDFVAFGGVQATIEAEAREH
CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHEECCEEEEEEHHHHHH
AEELVAAAADAVVKEAGVTPQIMVKSGKPVEVVREVIGASDEIAALVLATAATGAPGPLV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
SHFTGQDAGTLPCPVMLVPGGIDLARLDALS
CCCCCCCCCCCCCCEEEECCCCCEECCCCCC
>Mature Secondary Structure
MRTYLVVIDDSPEASLALRFAARRAARTGGGVMVLAIVPPQDFVAFGGVQATIEAEAREH
CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHEECCEEEEEEHHHHHH
AEELVAAAADAVVKEAGVTPQIMVKSGKPVEVVREVIGASDEIAALVLATAATGAPGPLV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
SHFTGQDAGTLPCPVMLVPGGIDLARLDALS
CCCCCCCCCCCCCCEEEECCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA