| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is atpG [H]
Identifier: 103486567
GI number: 103486567
Start: 1108838
End: 1109338
Strand: Direct
Name: atpG [H]
Synonym: Sala_1078
Alternate gene names: 103486567
Gene position: 1108838-1109338 (Clockwise)
Preceding gene: 103486566
Following gene: 103486568
Centisome position: 33.15
GC content: 64.87
Gene sequence:
>501_bases ATGCCCCAGATAGCCCAGCTCACCGCTGACAATTGGTATCTTGCCTCGCAGCTTTTCTGGCTGCTGGTCGTGTTCGCCGG CATTTACGTCGTAATCGGCCGCGGCATGTTGCCGAAGATCGAGGCGACGGTGGACGCGCGCGACCGCAAGGTTGCCGACG ATCTGGCGGCGGCAAAAGCGGCGCATGCCGCTGCCGACAAGCTGGAGGAAAGTTATCGCCAGCAGGGCGAGGCAAGCCGC GCCGCCGCGCAGAAGGCGGTGGCCGAAGCCAGGGACAAGGCCGCGAAGGACGCCGAAAAGCGTTTGGCCCGGATCGATGC CGAACTCGCCGCCAAATTGTCGGCGGCCGAGGCTGACATCGCGGCAGCGCGCTCGTCGGCGATGGCGGAAATCGAATCAG TCGCAGCCGAAGCAGCGGGCGAACTCGTAGCCAAGCTGTCGGGCGTGAAAGTTGCTGCGGCGGATGCCAAGGCGGCAGTT AAGGCGGTGCTTCATGGCTGA
Upstream 100 bases:
>100_bases ATCCTGCTCTTCGTCGTCTGATTTCGACGATCGGTGATGCCGGACCTTCGGGACCGGCGTTGCCGACAGCAGCTTTTCAA GTTTTCAAGGTTCGCCTTCC
Downstream 100 bases:
>100_bases TTTCACCCTGATCCTTGCCGAAGGCGTTGTCGAACCGACGGCCTTCGGTCTCGACGCGACCGTATGGGTCTCGATCGCGA TGCTCGTCTTTCTGGGCATT
Product: H+-transporting two-sector ATPase, B/B' subunit
Products: ADP; phosphate; H+
Alternate protein names: ATP synthase F(0) sector subunit b/b'; ATPase subunit II; F-type ATPase subunit b/b'; F-ATPase subunit b/b' [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPQIAQLTADNWYLASQLFWLLVVFAGIYVVIGRGMLPKIEATVDARDRKVADDLAAAKAAHAAADKLEESYRQQGEASR AAAQKAVAEARDKAAKDAEKRLARIDAELAAKLSAAEADIAAARSSAMAEIESVAAEAAGELVAKLSGVKVAAADAKAAV KAVLHG
Sequences:
>Translated_166_residues MPQIAQLTADNWYLASQLFWLLVVFAGIYVVIGRGMLPKIEATVDARDRKVADDLAAAKAAHAAADKLEESYRQQGEASR AAAQKAVAEARDKAAKDAEKRLARIDAELAAKLSAAEADIAAARSSAMAEIESVAAEAAGELVAKLSGVKVAAADAKAAV KAVLHG >Mature_165_residues PQIAQLTADNWYLASQLFWLLVVFAGIYVVIGRGMLPKIEATVDARDRKVADDLAAAKAAHAAADKLEESYRQQGEASRA AAQKAVAEARDKAAKDAEKRLARIDAELAAKLSAAEADIAAARSSAMAEIESVAAEAAGELVAKLSGVKVAAADAKAAVK AVLHG
Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria [H]
COG id: COG0711
COG function: function code C; F0F1-type ATP synthase, subunit b
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase B chain family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002146 [H]
Pfam domain/function: PF00430 ATP-synt_B [H]
EC number: 3.6.3.14
Molecular weight: Translated: 17253; Mature: 17122
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIAQLTADNWYLASQLFWLLVVFAGIYVVIGRGMLPKIEATVDARDRKVADDLAAAKA CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHH AHAAADKLEESYRQQGEASRAAAQKAVAEARDKAAKDAEKRLARIDAELAAKLSAAEADI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAARSSAMAEIESVAAEAAGELVAKLSGVKVAAADAKAAVKAVLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PQIAQLTADNWYLASQLFWLLVVFAGIYVVIGRGMLPKIEATVDARDRKVADDLAAAKA CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHH AHAAADKLEESYRQQGEASRAAAQKAVAEARDKAAKDAEKRLARIDAELAAKLSAAEADI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAARSSAMAEIESVAAEAAGELVAKLSGVKVAAADAKAAVKAVLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]