BacMap

Definition	Sphingopyxis alaskensis RB2256, complete genome.
Accession	NC_008048
Length	3,345,170

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The map label for this gene is rhlE [H]

Identifier: 103486540

GI number: 103486540

Start: 1084987

End: 1086363

Strand: Direct

Name: rhlE [H]

Synonym: Sala_1051

Alternate gene names: 103486540

Gene position: 1084987-1086363 (Clockwise)

Preceding gene: 103486539

Following gene: 103486542

Centisome position: 32.43

GC content: 64.71

Gene sequence:

>1377_bases
ATGAAATTTGCCGACCTCGGCCTTTCCGACGAACTTTTGCGCGCGATCGACGAGTCGGGCTATAGCGAACCGACTGCAAT
CCAGGCGGGCGCCATCCCCTCTGTCCTGATGATGCGCGACATGATCGGCATTGCACAGACGGGAACGGGGAAAACCGCCT
CCTTTGTGCTGCCGATGATCGACATATTGGCGCACGGCCGCGCCCGCGCGTTGATGCCGCGTTCGCTGATCCTCGAGCCG
ACGCGCGAACTGGCGGCGCAGGTCGCCGAAAACTTCGAAAAATACGGCAAGTATCACAAGCTGTCGATGGCGCTGCTGAT
CGGCGGCGTGCAGATGGGCGACCAGATCAAGGCGCTCGAAAAAGGTGTCGATGTGCTGATCGCGACGCCGGGGCGGCTGA
TGGACCTGTTCGAGCGCGGCAAGATCTTGCTCACCGGCTGCAACCTGCTGGTGATCGACGAGGCCGACCGGATGCTCGAC
ATGGGGTTCATTCCCGACATCGAGAATATCTGCACCAAGCTGCCTGCCAATCGCCAGACCCTGCTGTTCTCGGCGACGAT
GCCGCCGCCGATCAAGAAGCTGGCCGACAAGTTCCTGTCGAACCCCAAGACGATCGAGGTCGCGCGCCCCGCGAGCCGTA
ACGAGAATATCGAGCAGTTCGTGGTCAAGACGTCCGAACGCGGCAAGCGCGATACGCTGCGCGGGCTGATCGAGGCCGAG
GATCTGTCGACCGCGATCGTCTTTTGCAACCGCAAGACCACCGTGCGCGAGCTGGCGAAATCGCTCCAGCGCTCCGGCTA
CAGGGCCGGCGAGATCCATGGCGACATGGACCAGTCGAGCCGCATCGCCGAACTCGACCGGTTCAAGGCGGGAACGATCA
ACATATTGGTGGCGTCGGACGTCGCGGCGCGCGGGCTCGACGTCAAGGGCGTCAGCCATGTGTTCAACTTCGACGCGCCC
TGGCATCCCGACGATTATGTCCACCGCATCGGCCGCACCGGCCGCGCGGGGGCACAAGGGCGTGCTTTCACATTGGTGAC
GCCGTCGGATGACGAGGCGATCGACAATATCCAGAAGCTGACCGGTTACAATATCCCCGTCCACGGGACCGCCACGGCCG
ACGCCGCCCCGGCGAAGGACGAGCCGCGCGAGGAGCGCGAACCGCGCCGCGAAAGCCGTCCGGCCCGTGGTGGACGCGGT
CGTGCCAAGCCTGCCGACCCGGACGCGAAACGCGCGGACGACAAGCGCAACGAAGCTCCCAGGAAAAAGGACGCGGGCCG
CAAGCCGCCGCCCGCCGCGCGGCAGGACGACGATGGCTCCGACGACGGCTGGAATGGCCCGATGCCGGGTTTCCTGTCGG
TTGGGTTCGGGAGCTGA

Upstream 100 bases:

>100_bases
GGCATTTCTTGACTTTTCCTGCTTCTTTGCCCAATGGCCGCGGCAGCGCTTGCCTGCGTGGGCGGCTGGGCGCACCCTTA
TCTTCCGGACATGATGCCAC

Downstream 100 bases:

>100_bases
GCAAAAGCTCTACTGAAGTGCTGGACCTGCCCAGAACACGGCTCTGGGGTTGGGGCGGCGGTCTTCCACCTTCGTCTTTC
CCGCGAAAGCGGGAATGACG

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKFADLGLSDELLRAIDESGYSEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMIDILAHGRARALMPRSLILEP
TRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQIKALEKGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLD
MGFIPDIENICTKLPANRQTLLFSATMPPPIKKLADKFLSNPKTIEVARPASRNENIEQFVVKTSERGKRDTLRGLIEAE
DLSTAIVFCNRKTTVRELAKSLQRSGYRAGEIHGDMDQSSRIAELDRFKAGTINILVASDVAARGLDVKGVSHVFNFDAP
WHPDDYVHRIGRTGRAGAQGRAFTLVTPSDDEAIDNIQKLTGYNIPVHGTATADAAPAKDEPREEREPRRESRPARGGRG
RAKPADPDAKRADDKRNEAPRKKDAGRKPPPAARQDDDGSDDGWNGPMPGFLSVGFGS

Sequences:

>Translated_458_residues
MKFADLGLSDELLRAIDESGYSEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMIDILAHGRARALMPRSLILEP
TRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQIKALEKGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLD
MGFIPDIENICTKLPANRQTLLFSATMPPPIKKLADKFLSNPKTIEVARPASRNENIEQFVVKTSERGKRDTLRGLIEAE
DLSTAIVFCNRKTTVRELAKSLQRSGYRAGEIHGDMDQSSRIAELDRFKAGTINILVASDVAARGLDVKGVSHVFNFDAP
WHPDDYVHRIGRTGRAGAQGRAFTLVTPSDDEAIDNIQKLTGYNIPVHGTATADAAPAKDEPREEREPRRESRPARGGRG
RAKPADPDAKRADDKRNEAPRKKDAGRKPPPAARQDDDGSDDGWNGPMPGFLSVGFGS
>Mature_458_residues
MKFADLGLSDELLRAIDESGYSEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMIDILAHGRARALMPRSLILEP
TRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQIKALEKGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLD
MGFIPDIENICTKLPANRQTLLFSATMPPPIKKLADKFLSNPKTIEVARPASRNENIEQFVVKTSERGKRDTLRGLIEAE
DLSTAIVFCNRKTTVRELAKSLQRSGYRAGEIHGDMDQSSRIAELDRFKAGTINILVASDVAARGLDVKGVSHVFNFDAP
WHPDDYVHRIGRTGRAGAQGRAFTLVTPSDDEAIDNIQKLTGYNIPVHGTATADAAPAKDEPREEREPRRESRPARGGRG
RAKPADPDAKRADDKRNEAPRKKDAGRKPPPAARQDDDGSDDGWNGPMPGFLSVGFGS

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=39.7368421052632, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=40.2739726027397, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=42.9378531073446, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=42.9378531073446, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI45446747, Length=370, Percent_Identity=41.0810810810811, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI45446743, Length=370, Percent_Identity=41.0810810810811, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=41.5977961432507, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=42.4657534246575, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=42.4657534246575, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=42.4657534246575, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=41.9178082191781, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=41.9178082191781, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=38.8429752066116, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=37.5335120643432, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI222352149, Length=396, Percent_Identity=38.1313131313131, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=38.0821917808219, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=38.0821917808219, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=38.0821917808219, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI7661920, Length=367, Percent_Identity=37.0572207084469, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=38.0821917808219, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=39.8907103825137, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=38.5245901639344, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=37.2602739726027, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI55749865, Length=399, Percent_Identity=35.3383458646617, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI164664518, Length=391, Percent_Identity=33.5038363171356, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI51094101, Length=367, Percent_Identity=34.0599455040872, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI164419743, Length=367, Percent_Identity=34.0599455040872, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=35.9773371104816, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=36.1413043478261, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=35.6948228882834, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=33.8501291989664, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI13129006, Length=391, Percent_Identity=32.7365728900256, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI13514831, Length=372, Percent_Identity=33.8709677419355, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=34.9162011173184, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=34.9162011173184, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI21040371, Length=360, Percent_Identity=31.1111111111111, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.7262569832402, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.7262569832402, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI62241022, Length=351, Percent_Identity=34.7578347578348, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI38327634, Length=355, Percent_Identity=33.5211267605634, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=33.1460674157303, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=33.0645161290323, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI17505907, Length=412, Percent_Identity=31.0679611650485, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=35.3125, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=30.6878306878307, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38569503, Length=379, Percent_Identity=31.1345646437995, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=28.3544303797468, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=30.5555555555556, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI4826686, Length=344, Percent_Identity=30.8139534883721, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI256773275, Length=398, Percent_Identity=30.9045226130653, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI9966805, Length=316, Percent_Identity=28.7974683544304, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI154759257, Length=407, Percent_Identity=27.7641277641278, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=36.9158878504673, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=48.1081081081081, Blast_Score=333, Evalue=1e-92,
Organism=Escherichia coli, GI87082221, Length=365, Percent_Identity=42.1917808219178, Blast_Score=295, Evalue=4e-81,
Organism=Escherichia coli, GI1790214, Length=416, Percent_Identity=39.4230769230769, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1787605, Length=345, Percent_Identity=40.2898550724638, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1788930, Length=341, Percent_Identity=41.3489736070381, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI48994977, Length=349, Percent_Identity=24.0687679083095, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=40.1055408970976, Blast_Score=279, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=42.4657534246575, Blast_Score=267, Evalue=7e-72,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=43.2876712328767, Blast_Score=265, Evalue=4e-71,
Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=43.2876712328767, Blast_Score=265, Evalue=4e-71,
Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=43.1318681318681, Blast_Score=265, Evalue=5e-71,
Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=39.6648044692737, Blast_Score=254, Evalue=9e-68,
Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=38.4615384615385, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=40.3899721448468, Blast_Score=252, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=38.1868131868132, Blast_Score=251, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=41.4985590778098, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17507945, Length=368, Percent_Identity=39.6739130434783, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=38.6740331491713, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=34.3163538873995, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=36.5853658536585, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=36.1702127659575, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=376, Percent_Identity=35.3723404255319, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=34.7593582887701, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17552114, Length=359, Percent_Identity=33.1476323119777, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=34.5945945945946, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.0809248554913, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=32.0809248554913, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=35.8126721763085, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI115532548, Length=387, Percent_Identity=31.7829457364341, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI115532546, Length=387, Percent_Identity=31.7829457364341, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=30.3030303030303, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=33.0708661417323, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=33.0708661417323, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=33.0708661417323, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=357, Percent_Identity=32.2128851540616, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=31.1046511627907, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=30.8673469387755, Blast_Score=164, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17556951, Length=348, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=31.6195372750643, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=31.4432989690722, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=26.4851485148515, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=30.6406685236769, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=30.6666666666667, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI25148291, Length=347, Percent_Identity=30.5475504322767, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=27.5, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI25148205, Length=331, Percent_Identity=25.6797583081571, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=214, Percent_Identity=29.4392523364486, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=42.5287356321839, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17566630, Length=337, Percent_Identity=24.0356083086053, Blast_Score=83, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=42.296918767507, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=39.3617021276596, Blast_Score=266, Evalue=3e-72,
Organism=Saccharomyces cerevisiae, GI6324778, Length=411, Percent_Identity=37.712895377129, Blast_Score=261, Evalue=1e-70,
Organism=Saccharomyces cerevisiae, GI6321856, Length=410, Percent_Identity=38.2926829268293, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=36.4611260053619, Blast_Score=239, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=39.1061452513966, Blast_Score=236, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=36.9146005509642, Blast_Score=236, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=36.6946778711485, Blast_Score=219, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=35.8090185676393, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320173, Length=403, Percent_Identity=32.258064516129, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=34.6153846153846, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6321963, Length=400, Percent_Identity=35.75, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=34.7222222222222, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=34.5205479452055, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=34.5205479452055, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=33.6898395721925, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=373, Percent_Identity=34.0482573726542, Blast_Score=189, Evalue=9e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=358, Percent_Identity=31.8435754189944, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=30.9178743961353, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=383, Percent_Identity=33.6814621409922, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=402, Percent_Identity=29.8507462686567, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=30.6666666666667, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6322876, Length=440, Percent_Identity=26.5909090909091, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323306, Length=315, Percent_Identity=29.8412698412698, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324366, Length=365, Percent_Identity=26.027397260274, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6321374, Length=380, Percent_Identity=25, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28574962, Length=367, Percent_Identity=43.3242506811989, Blast_Score=282, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=41.0112359550562, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=37.9947229551451, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=38.9355742296919, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24585582, Length=415, Percent_Identity=36.3855421686747, Blast_Score=254, Evalue=6e-68,
Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=38.5826771653543, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=38.8429752066116, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI21355075, Length=346, Percent_Identity=38.728323699422, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24642151, Length=376, Percent_Identity=36.1702127659575, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=37.0879120879121, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24645031, Length=364, Percent_Identity=36.5384615384615, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=41.6666666666667, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21356161, Length=362, Percent_Identity=38.3977900552486, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=34.3406593406593, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=34.3406593406593, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=36.1643835616438, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=36.1643835616438, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=36.1643835616438, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=36.1643835616438, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI28575014, Length=377, Percent_Identity=30.7692307692308, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=32.8042328042328, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=32.8042328042328, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=32.1808510638298, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=31.0055865921788, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=31.0055865921788, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=31.0055865921788, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=32.8125, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=33.2432432432432, Blast_Score=175, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.5934065934066, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=32.7777777777778, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI17647335, Length=354, Percent_Identity=31.0734463276836, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=27.2264631043257, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.5810397553517, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI20130173, Length=311, Percent_Identity=29.5819935691318, Blast_Score=141, Evalue=7e-34,
Organism=Drosophila melanogaster, GI17136666, Length=391, Percent_Identity=29.923273657289, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=29.1428571428571, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI18859659, Length=257, Percent_Identity=30.3501945525292, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI28571338, Length=257, Percent_Identity=30.3501945525292, Blast_Score=115, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49988; Mature: 49988

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFADLGLSDELLRAIDESGYSEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMI
CCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DILAHGRARALMPRSLILEPTRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQIKALE
HHHHCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH
KGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLDMGFIPDIENICTKLPANRQT
CCCEEEEECCHHHHHHHHCCCEEEEECCEEEECCCHHHHHCCCCCCHHHHHHHCCCCCEE
LLFSATMPPPIKKLADKFLSNPKTIEVARPASRNENIEQFVVKTSERGKRDTLRGLIEAE
EEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
DLSTAIVFCNRKTTVRELAKSLQRSGYRAGEIHGDMDQSSRIAELDRFKAGTINILVASD
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECC
VAARGLDVKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAQGRAFTLVTPSDDEAIDNIQKL
HHHCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
TGYNIPVHGTATADAAPAKDEPREEREPRRESRPARGGRGRAKPADPDAKRADDKRNEAP
HCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHCCCHHHCCC
RKKDAGRKPPPAARQDDDGSDDGWNGPMPGFLSVGFGS
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MKFADLGLSDELLRAIDESGYSEPTAIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMI
CCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DILAHGRARALMPRSLILEPTRELAAQVAENFEKYGKYHKLSMALLIGGVQMGDQIKALE
HHHHCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH
KGVDVLIATPGRLMDLFERGKILLTGCNLLVIDEADRMLDMGFIPDIENICTKLPANRQT
CCCEEEEECCHHHHHHHHCCCEEEEECCEEEECCCHHHHHCCCCCCHHHHHHHCCCCCEE
LLFSATMPPPIKKLADKFLSNPKTIEVARPASRNENIEQFVVKTSERGKRDTLRGLIEAE
EEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
DLSTAIVFCNRKTTVRELAKSLQRSGYRAGEIHGDMDQSSRIAELDRFKAGTINILVASD
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECC
VAARGLDVKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAQGRAFTLVTPSDDEAIDNIQKL
HHHCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
TGYNIPVHGTATADAAPAKDEPREEREPRRESRPARGGRGRAKPADPDAKRADDKRNEAP
HCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHCCCHHHCCC
RKKDAGRKPPPAARQDDDGSDDGWNGPMPGFLSVGFGS
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]