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The map label for this gene is rpsU [H]

Identifier: 103486528

GI number: 103486528

Start: 1072884

End: 1073090

Strand: Direct

Name: rpsU [H]

Synonym: Sala_1039

Alternate gene names: 103486528

Gene position: 1072884-1073090 (Clockwise)

Preceding gene: 103486524

Following gene: 103486530

Centisome position: 32.07

GC content: 62.32

Gene sequence:

>207_bases
ATGCAGATCATCGTTCGCGACAATAATGTCGACCAGGCCCTTCGCGCGCTCAAGAAGAAGCTGCAGCGCGAGGGTGTGTA
TCGCGAAATGAAGCTGCGCCGTCATTACGAAAAGCCCAGCGAAAAGCGCGCCCGCGAGCGCGCCGCCGCCGTCCGCCGCG
CCCGCAAGATGGAACGCAAGCGGATGGAGCGCGACGGGATCAAGTAA

Upstream 100 bases:

>100_bases
TTCGCGGCGCTCTTTTTATTGCCCGAATATCGGCGGTTTGCGGCAGACCGGATGACCCGGCGGCCCGGACTGTTTTGACG
AACAGGAGACGACACGGTTT

Downstream 100 bases:

>100_bases
GACCCGTTCCCGTTCGGGATCCAGTTCGTGAAAAGGGCGCTGCGGCAACGCGGCGCCCTTTTTCGTTTTGGTGTACAAGC
GAGCGAGAGGAGAGGGCGGT

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRARERAAAVRRARKMERKRMERDGIK

Sequences:

>Translated_68_residues
MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRARERAAAVRRARKMERKRMERDGIK
>Mature_68_residues
MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRARERAAAVRRARKMERKRMERDGIK

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- InterPro:   IPR018278
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 8349; Mature: 8349

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRARERAAAVRRARKMERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RMERDGIK
HHHHCCCC
>Mature Secondary Structure
MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRARERAAAVRRARKMERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RMERDGIK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA