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The map label for this gene is frc [H]

Identifier: 103486391

GI number: 103486391

Start: 909548

End: 910780

Strand: Reverse

Name: frc [H]

Synonym: Sala_0901

Alternate gene names: 103486391

Gene position: 910780-909548 (Counterclockwise)

Preceding gene: 103486392

Following gene: 103486386

Centisome position: 27.23

GC content: 62.94

Gene sequence:

>1233_bases
ATGACCAAGGTAATGGAAGGCGTCCGCGTCCTGGAAGTCGCACAATTCACCTTCGTGCCGGCAGCGGGGGGCGTGATGAC
CGACTGGGGGGCCGATGTGATCAAGATCGAGCATCCCGTGCGCGGCGACGCACAGCGCGGTATCCAGATGCTGCAACGGC
TGGCGGTCAATCCGCAGCGATCGTCGCTGATGCAGCATCCCAATCGCGGCAAGCGCAGCGTCGGCATCGACATTTCGACC
GAAGAAGGCCGCGCGCTGCTGTACGAGATTGCCAAGACCGCCGATGTATTTCTGACCAACTATCTGCCGTCGGCGCGGCA
GAAGCTGAAGATCGATATCGAGCATATCCGCGCTGCCAACCCCGACATCATCTATGTCCGCGGCAGCGCCTTTGGCGACA
AGGGGCCGGAACGCGACAAGGGCGGGTTCGATTCGACCGCCTATTGGGCGCGCGGCGGATCGGCGGTGCTGGTAACGCCG
AAGGCGCTCGACGGCCCGTTGACCCAGCCCGGCCCGGCCTATGGCGACACGATCGGGGGCATGAACATCGCGGGCGGCAT
CGCGGCGGCCCTGTTCCACCGCGAACGCACCGGCGAAGCCACCGAGGTCGATGTGTCGCTGCTGTCGTCCGGCATATGGG
CCACCGCCTGCTCGATCGATGTTGCGATGGAACTGGGCAGGGATCCCTTTGAAAACCAGATGCCCGGCGACGCGCAGGCG
GTCGGCACCAACCCTTTCATGGGCGTATTCAAGACATCGGACGGGAAATTCATCAACCTGACCGTGCTGTCGCCCGGCCC
CTATATCGAGGATGTGTTCGGCCATCTGGGCATCCCGGAGGCGGCGAAGGATGAACGCTTTTCCACCGCCGAAGCGATCA
TGGCGAATGCTGCCGAAGCCTATCCGCTCGTCAAGGAGGCGATCGCGGCAAAGCCCTTCGATTATTGGACCCGGCAGCTC
AAGACGATGAAGGGCCAATGGGCGGCCTATCAATCGGTGCACGATGTTGCCAGCGACGAACAGGTGCTGGCCAACGACCT
GATTTTCGAGGTCGAGAGCGCCGATGGCGGTCCGCCGATCCGGCTCGTCGCCAATCCGGTGCAATTCGATCGCGCGGGCG
TCGAAAACTGTCGCGCGCCGGAAGCTTCCGAACATACCGAATTGTTCCTGATGGAACTGGGCCTCGATTGGGAGCGGATC
GAAGCGCTGAAGTCCAGCAAGGCGATCGCCTGA

Upstream 100 bases:

>100_bases
AGCGGTCGGGCTATGGCCGCGAATATGGCGAGGATGGCCTGAACGAATTCACCTATCAAAAGGTGATCGGTTTCCACGCC
GAATAGGAAAGGGACGAGGC

Downstream 100 bases:

>100_bases
AACGGAAGCGAGCATGGCGGATCCTCCGCTTCGTGTCGGGATGATCAGCGCCGCGTGGGGCGCAAAGGCTGTTTAATCCC
GCCTGATCAGCATCGACCCT

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTKVMEGVRVLEVAQFTFVPAAGGVMTDWGADVIKIEHPVRGDAQRGIQMLQRLAVNPQRSSLMQHPNRGKRSVGIDIST
EEGRALLYEIAKTADVFLTNYLPSARQKLKIDIEHIRAANPDIIYVRGSAFGDKGPERDKGGFDSTAYWARGGSAVLVTP
KALDGPLTQPGPAYGDTIGGMNIAGGIAAALFHRERTGEATEVDVSLLSSGIWATACSIDVAMELGRDPFENQMPGDAQA
VGTNPFMGVFKTSDGKFINLTVLSPGPYIEDVFGHLGIPEAAKDERFSTAEAIMANAAEAYPLVKEAIAAKPFDYWTRQL
KTMKGQWAAYQSVHDVASDEQVLANDLIFEVESADGGPPIRLVANPVQFDRAGVENCRAPEASEHTELFLMELGLDWERI
EALKSSKAIA

Sequences:

>Translated_410_residues
MTKVMEGVRVLEVAQFTFVPAAGGVMTDWGADVIKIEHPVRGDAQRGIQMLQRLAVNPQRSSLMQHPNRGKRSVGIDIST
EEGRALLYEIAKTADVFLTNYLPSARQKLKIDIEHIRAANPDIIYVRGSAFGDKGPERDKGGFDSTAYWARGGSAVLVTP
KALDGPLTQPGPAYGDTIGGMNIAGGIAAALFHRERTGEATEVDVSLLSSGIWATACSIDVAMELGRDPFENQMPGDAQA
VGTNPFMGVFKTSDGKFINLTVLSPGPYIEDVFGHLGIPEAAKDERFSTAEAIMANAAEAYPLVKEAIAAKPFDYWTRQL
KTMKGQWAAYQSVHDVASDEQVLANDLIFEVESADGGPPIRLVANPVQFDRAGVENCRAPEASEHTELFLMELGLDWERI
EALKSSKAIA
>Mature_409_residues
TKVMEGVRVLEVAQFTFVPAAGGVMTDWGADVIKIEHPVRGDAQRGIQMLQRLAVNPQRSSLMQHPNRGKRSVGIDISTE
EGRALLYEIAKTADVFLTNYLPSARQKLKIDIEHIRAANPDIIYVRGSAFGDKGPERDKGGFDSTAYWARGGSAVLVTPK
ALDGPLTQPGPAYGDTIGGMNIAGGIAAALFHRERTGEATEVDVSLLSSGIWATACSIDVAMELGRDPFENQMPGDAQAV
GTNPFMGVFKTSDGKFINLTVLSPGPYIEDVFGHLGIPEAAKDERFSTAEAIMANAAEAYPLVKEAIAAKPFDYWTRQLK
TMKGQWAAYQSVHDVASDEQVLANDLIFEVESADGGPPIRLVANPVQFDRAGVENCRAPEASEHTELFLMELGLDWERIE
ALKSSKAIA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=399, Percent_Identity=26.3157894736842, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI300863124, Length=425, Percent_Identity=25.8823529411765, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI42794625, Length=416, Percent_Identity=26.2019230769231, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI266456254, Length=416, Percent_Identity=26.2019230769231, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI266458397, Length=289, Percent_Identity=28.3737024221453, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI266458393, Length=318, Percent_Identity=27.6729559748428, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI300863126, Length=399, Percent_Identity=23.5588972431078, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI87082093, Length=382, Percent_Identity=22.7748691099476, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788717, Length=427, Percent_Identity=25.7611241217799, Blast_Score=99, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI115535051, Length=348, Percent_Identity=24.1379310344828, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648431, Length=413, Percent_Identity=27.3607748184019, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24585488, Length=280, Percent_Identity=26.7857142857143, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 44334; Mature: 44202

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVMEGVRVLEVAQFTFVPAAGGVMTDWGADVIKIEHPVRGDAQRGIQMLQRLAVNPQR
CCHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHH
SSLMQHPNRGKRSVGIDISTEEGRALLYEIAKTADVFLTNYLPSARQKLKIDIEHIRAAN
HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEHHHHHCCC
PDIIYVRGSAFGDKGPERDKGGFDSTAYWARGGSAVLVTPKALDGPLTQPGPAYGDTIGG
CCEEEEECCCCCCCCCCCCCCCCCCCHHEECCCCEEEEECHHCCCCCCCCCCCCCCCCCC
MNIAGGIAAALFHRERTGEATEVDVSLLSSGIWATACSIDVAMELGRDPFENQMPGDAQA
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE
VGTNPFMGVFKTSDGKFINLTVLSPGPYIEDVFGHLGIPEAAKDERFSTAEAIMANAAEA
CCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YPLVKEAIAAKPFDYWTRQLKTMKGQWAAYQSVHDVASDEQVLANDLIFEVESADGGPPI
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCCE
RLVANPVQFDRAGVENCRAPEASEHTELFLMELGLDWERIEALKSSKAIA
EEEECCHHHHHCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKVMEGVRVLEVAQFTFVPAAGGVMTDWGADVIKIEHPVRGDAQRGIQMLQRLAVNPQR
CHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHH
SSLMQHPNRGKRSVGIDISTEEGRALLYEIAKTADVFLTNYLPSARQKLKIDIEHIRAAN
HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEHHHHHCCC
PDIIYVRGSAFGDKGPERDKGGFDSTAYWARGGSAVLVTPKALDGPLTQPGPAYGDTIGG
CCEEEEECCCCCCCCCCCCCCCCCCCHHEECCCCEEEEECHHCCCCCCCCCCCCCCCCCC
MNIAGGIAAALFHRERTGEATEVDVSLLSSGIWATACSIDVAMELGRDPFENQMPGDAQA
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE
VGTNPFMGVFKTSDGKFINLTVLSPGPYIEDVFGHLGIPEAAKDERFSTAEAIMANAAEA
CCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YPLVKEAIAAKPFDYWTRQLKTMKGQWAAYQSVHDVASDEQVLANDLIFEVESADGGPPI
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCCE
RLVANPVQFDRAGVENCRAPEASEHTELFLMELGLDWERIEALKSSKAIA
EEEECCHHHHHCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]