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The map label for this gene is cirA [C]

Identifier: 103486376

GI number: 103486376

Start: 891742

End: 894162

Strand: Direct

Name: cirA [C]

Synonym: Sala_0886

Alternate gene names: 103486376

Gene position: 891742-894162 (Clockwise)

Preceding gene: 103486375

Following gene: 103486377

Centisome position: 26.66

GC content: 60.72

Gene sequence:

>2421_bases
ATGAATATCAACCACAAGCGTGATGCGTCCCGGATGCTTGCGACCGTCTCGGTCGCCGTCCTGGCTCTTACCAGCACGTC
TGCCTGGGCGCAGGAAGCTCCCGCTCCGGCTCCGGCGGACGAGACGATTTATACCGATGATGCGATCGTCGTCATCGGCG
TGACCAAACAGAGCGCCAATATTCAGGACACGCCAATCGCAATTACCGCGTTCAGCGGCGAAATGCTGACCGAACAGGGA
ATCGGCAAGGTCGAGGACATTGCGACCTTCACGCCCGGTTTCAACATTCGCGGGGCGGGCAATAATCCGACCGCGCTGAC
CCTTTCCATGCGCGGCCAGATCCAGAACGACACGCTGGCAACGCTGGAACCGTCGGTCGGCACCTACCTCGACGAAATGT
ATGTCGCACGTGCCTATGGCCTCAATGTCGAACTCGTCGATGTCGAAAGCGTACAGGTGCTGAAGGGGCCACAGGGCACG
CTCTTCGGGCGCAACACGTCCGCCGGTGCGGTGCTGATCCAGACGGCCAATCCGCGCTATGACGAGTTTTCCGGCAAGGT
GAGCGCCACATACGGCCGCTTCGACGAGCGCACGGGGCAGGCGGTGCTCAATCTCGGCCTGTCGGACAGTCTCGCGATCC
GCGGTGCGCTTTATTACCAAAAGCGCGACGGCTTCAAAACCGATGTCGACACGGGCGCCAAATACGAAGGACGCGAAACC
TGGAATGGCCGCGTCAAGCTTGGCTGGCGGCCGACCGAGAATCTGGAAATCATCCTGTCCGGCGAATGGTATGACACCTT
CATCGACGGCCCGGCACGCCAGAATCTCTTCTTCAACGCCCCGCCCAACTTCGGTGCCGCCAAGCCCATCGTCGATGGCA
TCGCCGCCGCCGACCGGGCGCAGTTCGACGGCAATCCGAACCGCGTTGCCATCACGCCGCCGGGCGCGGTGCCGGGCGCC
GATCCGCGCGGCATCTTCAACGATACGCGCACCCAGACCTATTCGGCGAAATTCATTCTCGACACCAGTTTTGGCCAGAT
CCGCTGGATCAACGGCTATCGCGGCGTCCAGAGCGAAAATCTGATCGACCTCGACGGCAGCAGCTTTAGGGCGCACTTCA
CCGAGGGCCGGCAGGATCTGAAGCAATATTCGTCCGAGCTGCAACTGACGGGAACGGTGTTTGATGACCGGCTGAATTTC
GCCAGTGGCCTGACCTATTTCCGCGAAACGGGTTTCGACCAGTCCCGTTCGAACCTCTTCGGCGCCACCTTCGCAGCGGG
GCCGACGGTTCCGGCGCAGTTTGTGGGTGCGACGAGCTGGTCGAACTTCTCGGGTTCGCTCGATAACGACAGCTTCGGTA
TGTATGCCCAGCTCAATTACGAGCTGACCGACGCATTGCGCGTCACAGGCGGTCTGCGTTACTCGATCGACGACAAGCGC
GTGACGACCCAGTCGGGCAATGTCGCGAACAATACCGATGTCTTTGTCAATTGCAGCCCGCCCACGGTGGCCGTGCCTTG
TCTGCGCAGCAGTCAGGAAACCTTCACCAACCTGTCGTACACCATCGGTGTCGATTATGACGTGACCCCGGACATCCTGG
TCTATGCCAAGCACAGCAAGGGCTATCGTTCGGGTGCGTTGCAGCTTCGCACACTGACGCTGGCGGATTCGATCCCGTCG
CAACCCGAACTGGTCTATGAACAGGAAGTAGGCATCAAGACGACCTTCCTCGACGGTCGCGGCACGTTCAACATCGCCGG
CTATCACAATGTCGTCAAGGACGCGCAGCGCAGCCCGGTCCTGGCGCCGAACGGTCAGAGCCAGACCGTGATCGAGAACG
CCGACACCGAAACCTGGGGGCTCGAAGCGGATGCCTCGATCGAGGTGGCCGACGGCTTCACTCTCTTTGCTTCGGGCGCA
CTCACCGATCCCAAATATACGCGCTACGAAGGCCGCGGCGTCTCCGGCGCGTTCGGCAGCCAGGTGATCGTGCCGATCGA
CAAATCGGATTATGATTTCGTGGGAATCGTCGAAAAACAGTTCTCGGTCGGTGCCAATCTGTCGAAGGATCTGGGCAGCG
TCGGCCTCGACGCCAACGTCGTCTACGCCTGGCAGGGCAAGATGCCGCAGATCGAACTTCCCGAAGCGCTGCTCACCTCG
ACGGGCATCGGCGGGCTGGGACTGACCCCGGCCCAAGCGGCCCAGGTCGCCGCCGTGTCGGACTCGGGCTCACTCGGCAT
TCTTAATGCTCGCGTGGCGCTGAAGTTCGGGCCGGAGAAAAATTTCGAGCTGGCGCTGTGGGGCAAGAATCTGACCAACG
ATCAGGAGCAGCAATATACGCTGCTGCTCAGCAACATTTATATCGGCACCTCCTATAACGAACCACGCAGCTATGGCGTG
ACCGCCAGCTATAAATTCTAG

Upstream 100 bases:

>100_bases
TCGACGTGAAATCCGTAATTGACTTGTCTGTCTTGTTAGACTTAGTTATATAACTGGACAAGCGAGGACGGCAGGAAGCC
TCGCGGGGAGGATGTTGGCC

Downstream 100 bases:

>100_bases
GTCCACAAGGGGCGCTCCTGCGGAGCAATTTGGGGAGGGACGGGCGACCGGACCTCCCCTTTTTTGTTGATGGAAGAGAT
AAGGCATGAAGGCGGATACA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug Domain Protein; Outer Membrane Protein; NB Dependent Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Transporter OMR Family; Outer Membrane Receptor Family Protein; Receptor -Mostly Fe Transport; Helix-Turn-Helix AraC Type; NB Dependent Receptor Protein; NB-Dependent Siderophore Receptor; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MNINHKRDASRMLATVSVAVLALTSTSAWAQEAPAPAPADETIYTDDAIVVIGVTKQSANIQDTPIAITAFSGEMLTEQG
IGKVEDIATFTPGFNIRGAGNNPTALTLSMRGQIQNDTLATLEPSVGTYLDEMYVARAYGLNVELVDVESVQVLKGPQGT
LFGRNTSAGAVLIQTANPRYDEFSGKVSATYGRFDERTGQAVLNLGLSDSLAIRGALYYQKRDGFKTDVDTGAKYEGRET
WNGRVKLGWRPTENLEIILSGEWYDTFIDGPARQNLFFNAPPNFGAAKPIVDGIAAADRAQFDGNPNRVAITPPGAVPGA
DPRGIFNDTRTQTYSAKFILDTSFGQIRWINGYRGVQSENLIDLDGSSFRAHFTEGRQDLKQYSSELQLTGTVFDDRLNF
ASGLTYFRETGFDQSRSNLFGATFAAGPTVPAQFVGATSWSNFSGSLDNDSFGMYAQLNYELTDALRVTGGLRYSIDDKR
VTTQSGNVANNTDVFVNCSPPTVAVPCLRSSQETFTNLSYTIGVDYDVTPDILVYAKHSKGYRSGALQLRTLTLADSIPS
QPELVYEQEVGIKTTFLDGRGTFNIAGYHNVVKDAQRSPVLAPNGQSQTVIENADTETWGLEADASIEVADGFTLFASGA
LTDPKYTRYEGRGVSGAFGSQVIVPIDKSDYDFVGIVEKQFSVGANLSKDLGSVGLDANVVYAWQGKMPQIELPEALLTS
TGIGGLGLTPAQAAQVAAVSDSGSLGILNARVALKFGPEKNFELALWGKNLTNDQEQQYTLLLSNIYIGTSYNEPRSYGV
TASYKF

Sequences:

>Translated_806_residues
MNINHKRDASRMLATVSVAVLALTSTSAWAQEAPAPAPADETIYTDDAIVVIGVTKQSANIQDTPIAITAFSGEMLTEQG
IGKVEDIATFTPGFNIRGAGNNPTALTLSMRGQIQNDTLATLEPSVGTYLDEMYVARAYGLNVELVDVESVQVLKGPQGT
LFGRNTSAGAVLIQTANPRYDEFSGKVSATYGRFDERTGQAVLNLGLSDSLAIRGALYYQKRDGFKTDVDTGAKYEGRET
WNGRVKLGWRPTENLEIILSGEWYDTFIDGPARQNLFFNAPPNFGAAKPIVDGIAAADRAQFDGNPNRVAITPPGAVPGA
DPRGIFNDTRTQTYSAKFILDTSFGQIRWINGYRGVQSENLIDLDGSSFRAHFTEGRQDLKQYSSELQLTGTVFDDRLNF
ASGLTYFRETGFDQSRSNLFGATFAAGPTVPAQFVGATSWSNFSGSLDNDSFGMYAQLNYELTDALRVTGGLRYSIDDKR
VTTQSGNVANNTDVFVNCSPPTVAVPCLRSSQETFTNLSYTIGVDYDVTPDILVYAKHSKGYRSGALQLRTLTLADSIPS
QPELVYEQEVGIKTTFLDGRGTFNIAGYHNVVKDAQRSPVLAPNGQSQTVIENADTETWGLEADASIEVADGFTLFASGA
LTDPKYTRYEGRGVSGAFGSQVIVPIDKSDYDFVGIVEKQFSVGANLSKDLGSVGLDANVVYAWQGKMPQIELPEALLTS
TGIGGLGLTPAQAAQVAAVSDSGSLGILNARVALKFGPEKNFELALWGKNLTNDQEQQYTLLLSNIYIGTSYNEPRSYGV
TASYKF
>Mature_806_residues
MNINHKRDASRMLATVSVAVLALTSTSAWAQEAPAPAPADETIYTDDAIVVIGVTKQSANIQDTPIAITAFSGEMLTEQG
IGKVEDIATFTPGFNIRGAGNNPTALTLSMRGQIQNDTLATLEPSVGTYLDEMYVARAYGLNVELVDVESVQVLKGPQGT
LFGRNTSAGAVLIQTANPRYDEFSGKVSATYGRFDERTGQAVLNLGLSDSLAIRGALYYQKRDGFKTDVDTGAKYEGRET
WNGRVKLGWRPTENLEIILSGEWYDTFIDGPARQNLFFNAPPNFGAAKPIVDGIAAADRAQFDGNPNRVAITPPGAVPGA
DPRGIFNDTRTQTYSAKFILDTSFGQIRWINGYRGVQSENLIDLDGSSFRAHFTEGRQDLKQYSSELQLTGTVFDDRLNF
ASGLTYFRETGFDQSRSNLFGATFAAGPTVPAQFVGATSWSNFSGSLDNDSFGMYAQLNYELTDALRVTGGLRYSIDDKR
VTTQSGNVANNTDVFVNCSPPTVAVPCLRSSQETFTNLSYTIGVDYDVTPDILVYAKHSKGYRSGALQLRTLTLADSIPS
QPELVYEQEVGIKTTFLDGRGTFNIAGYHNVVKDAQRSPVLAPNGQSQTVIENADTETWGLEADASIEVADGFTLFASGA
LTDPKYTRYEGRGVSGAFGSQVIVPIDKSDYDFVGIVEKQFSVGANLSKDLGSVGLDANVVYAWQGKMPQIELPEALLTS
TGIGGLGLTPAQAAQVAAVSDSGSLGILNARVALKFGPEKNFELALWGKNLTNDQEQQYTLLLSNIYIGTSYNEPRSYGV
TASYKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87019; Mature: 87019

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINHKRDASRMLATVSVAVLALTSTSAWAQEAPAPAPADETIYTDDAIVVIGVTKQSAN
CCCCCHHHHHHHHHHHEEEEEEEECCCHHHHCCCCCCCCCCEEEECCEEEEEEEECCCCC
IQDTPIAITAFSGEMLTEQGIGKVEDIATFTPGFNIRGAGNNPTALTLSMRGQIQNDTLA
CCCCCEEEEEECCCHHHHCCCCCHHHHEEECCCCEEEECCCCCCEEEEEECCCCCCCEEE
TLEPSVGTYLDEMYVARAYGLNVELVDVESVQVLKGPQGTLFGRNTSAGAVLIQTANPRY
EECCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEECCCCCCEEEEEECCCCC
DEFSGKVSATYGRFDERTGQAVLNLGLSDSLAIRGALYYQKRDGFKTDVDTGAKYEGRET
HHCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
WNGRVKLGWRPTENLEIILSGEWYDTFIDGPARQNLFFNAPPNFGAAKPIVDGIAAADRA
CCCEEEECCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCC
QFDGNPNRVAITPPGAVPGADPRGIFNDTRTQTYSAKFILDTSFGQIRWINGYRGVQSEN
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCC
LIDLDGSSFRAHFTEGRQDLKQYSSELQLTGTVFDDRLNFASGLTYFRETGFDQSRSNLF
EEEECCCCEEEEHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
GATFAAGPTVPAQFVGATSWSNFSGSLDNDSFGMYAQLNYELTDALRVTGGLRYSIDDKR
EEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEECCCE
VTTQSGNVANNTDVFVNCSPPTVAVPCLRSSQETFTNLSYTIGVDYDVTPDILVYAKHSK
EEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCEEEEEEECCCCCCCEEEEEECCC
GYRSGALQLRTLTLADSIPSQPELVYEQEVGIKTTFLDGRGTFNIAGYHNVVKDAQRSPV
CCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEEEECCCCEEEECCHHHHHHHHHCCCE
LAPNGQSQTVIENADTETWGLEADASIEVADGFTLFASGALTDPKYTRYEGRGVSGAFGS
ECCCCCCCEEEECCCCCEECCCCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCC
QVIVPIDKSDYDFVGIVEKQFSVGANLSKDLGSVGLDANVVYAWQGKMPQIELPEALLTS
EEEEEECCCCCCEEEEEEHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCEECCHHHHHH
TGIGGLGLTPAQAAQVAAVSDSGSLGILNARVALKFGPEKNFELALWGKNLTNDQEQQYT
CCCCCCCCCHHHHEEEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCHHEEE
LLLSNIYIGTSYNEPRSYGVTASYKF
EEEEEEEEECCCCCCCCCCEEEEECC
>Mature Secondary Structure
MNINHKRDASRMLATVSVAVLALTSTSAWAQEAPAPAPADETIYTDDAIVVIGVTKQSAN
CCCCCHHHHHHHHHHHEEEEEEEECCCHHHHCCCCCCCCCCEEEECCEEEEEEEECCCCC
IQDTPIAITAFSGEMLTEQGIGKVEDIATFTPGFNIRGAGNNPTALTLSMRGQIQNDTLA
CCCCCEEEEEECCCHHHHCCCCCHHHHEEECCCCEEEECCCCCCEEEEEECCCCCCCEEE
TLEPSVGTYLDEMYVARAYGLNVELVDVESVQVLKGPQGTLFGRNTSAGAVLIQTANPRY
EECCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEECCCCCCEEEEEECCCCC
DEFSGKVSATYGRFDERTGQAVLNLGLSDSLAIRGALYYQKRDGFKTDVDTGAKYEGRET
HHCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
WNGRVKLGWRPTENLEIILSGEWYDTFIDGPARQNLFFNAPPNFGAAKPIVDGIAAADRA
CCCEEEECCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCC
QFDGNPNRVAITPPGAVPGADPRGIFNDTRTQTYSAKFILDTSFGQIRWINGYRGVQSEN
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCC
LIDLDGSSFRAHFTEGRQDLKQYSSELQLTGTVFDDRLNFASGLTYFRETGFDQSRSNLF
EEEECCCCEEEEHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
GATFAAGPTVPAQFVGATSWSNFSGSLDNDSFGMYAQLNYELTDALRVTGGLRYSIDDKR
EEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEECCCE
VTTQSGNVANNTDVFVNCSPPTVAVPCLRSSQETFTNLSYTIGVDYDVTPDILVYAKHSK
EEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCEEEEEEECCCCCCCEEEEEECCC
GYRSGALQLRTLTLADSIPSQPELVYEQEVGIKTTFLDGRGTFNIAGYHNVVKDAQRSPV
CCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEEEECCCCEEEECCHHHHHHHHHCCCE
LAPNGQSQTVIENADTETWGLEADASIEVADGFTLFASGALTDPKYTRYEGRGVSGAFGS
ECCCCCCCEEEECCCCCEECCCCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCC
QVIVPIDKSDYDFVGIVEKQFSVGANLSKDLGSVGLDANVVYAWQGKMPQIELPEALLTS
EEEEEECCCCCCEEEEEEHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCEECCHHHHHH
TGIGGLGLTPAQAAQVAAVSDSGSLGILNARVALKFGPEKNFELALWGKNLTNDQEQQYT
CCCCCCCCCHHHHEEEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCHHEEE
LLLSNIYIGTSYNEPRSYGVTASYKF
EEEEEEEEECCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA