Click here to switch to the map view.

The map label for this gene is 103486363

Identifier: 103486363

GI number: 103486363

Start: 880353

End: 880913

Strand: Direct

Name: 103486363

Synonym: Sala_0873

Alternate gene names: NA

Gene position: 880353-880913 (Clockwise)

Preceding gene: 103486359

Following gene: 103486369

Centisome position: 26.32

GC content: 66.31

Gene sequence:

>561_bases
ATGGCGACAAAGATTGACCTGCGGCCGCGCGATGCCGACCGGACGCGCGAAGCGATATTGCAGGCAGCGCAGCAGGTGTT
TGCCGAGAAAGGTTTCGCCGCAGCGACGATACGCGACATCACTGCGCGTGCCGGGGTGAACCAGTCGCTCGTCAGCCGCT
ATTTCGGGGGCAAGCTCAAATTGTTCGAGGCCGCGCTGGAGGCGGCGCTGGACGCGCGGTTGATGACCGACCTGCCGAAA
GCCCGATTCGGCAAGCTTATCGTGGCGCGCTTCGCCGACGGGGACGGGCGCGTCAGCCCCCTGCCGATGCTGTTTCGCGC
AGCCGCCGACGCCGAAGCGCGCGTCGTGGCGCAGCGGTTGCTGCACGAAAGGGTGTTCGAACCGCTGGCGCGGTGGATCG
GCGGGGCCGATGCCAGCGTTCGCGCGGCGCGTTTGATGATGATCTCGCTCGGCTTCTTTACGTACCGCGAACAGCTTCCG
CTGGCCGGGTTTGCAGGCGCGGTCGATCCCGACCTGCGCCGCTGGCTGGAGGATGAGTTTCAGGCGATCGTCGACAACTG
A

Upstream 100 bases:

>100_bases
CCGGCGAACGCGCCGGTTGCACGGGCGACTCACTCATCTATCCTCTCCTCTTGCCAACAAGTAAACGCACGTTTACATCG
GGAGTCAACGGGGAGGCGTC

Downstream 100 bases:

>100_bases
CATCTCAGGCACTGGCCAATAAGGCGCTTCGCTCGGCCGGAATGACGAACTGTAGCAGATGCGCGCGCTTCAGGCACAGA
TGGGGCAAGGCTTCGTCGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MATKIDLRPRDADRTREAILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLKLFEAALEAALDARLMTDLPK
ARFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRLLHERVFEPLARWIGGADASVRAARLMMISLGFFTYREQLP
LAGFAGAVDPDLRRWLEDEFQAIVDN

Sequences:

>Translated_186_residues
MATKIDLRPRDADRTREAILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLKLFEAALEAALDARLMTDLPK
ARFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRLLHERVFEPLARWIGGADASVRAARLMMISLGFFTYREQLP
LAGFAGAVDPDLRRWLEDEFQAIVDN
>Mature_185_residues
ATKIDLRPRDADRTREAILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLKLFEAALEAALDARLMTDLPKA
RFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRLLHERVFEPLARWIGGADASVRAARLMMISLGFFTYREQLPL
AGFAGAVDPDLRRWLEDEFQAIVDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20548; Mature: 20417

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKIDLRPRDADRTREAILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHH
LFEAALEAALDARLMTDLPKARFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH
LHERVFEPLARWIGGADASVRAARLMMISLGFFTYREQLPLAGFAGAVDPDLRRWLEDEF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
QAIVDN
HHHHCC
>Mature Secondary Structure 
ATKIDLRPRDADRTREAILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHH
LFEAALEAALDARLMTDLPKARFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH
LHERVFEPLARWIGGADASVRAARLMMISLGFFTYREQLPLAGFAGAVDPDLRRWLEDEF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
QAIVDN
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA