Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yqgI [H]

Identifier: 103486314

GI number: 103486314

Start: 827135

End: 828391

Strand: Reverse

Name: yqgI [H]

Synonym: Sala_0824

Alternate gene names: 103486314

Gene position: 828391-827135 (Counterclockwise)

Preceding gene: 103486315

Following gene: 103486313

Centisome position: 24.76

GC content: 65.16

Gene sequence:

>1257_bases
ATGAATAGAGACACCGCCCCGACCGACTGGAAAGCCGCGGCGATGCAGAAACGCATCGCGGGCCGCTATGCCGCCGAACG
CCGGTTCAAGGCGATCGGGCTGGCGGCGGTGCTGCTGTCGGGCGCGTTCCTGGCGTTTCTGCTGTTCGTGATGGTCGGCA
ACGGCGCGCGCGGCTTTACCTATACGCATGTTTCGGTGCCGATCGACTTCAAGGCGACGCCGCTCACAATCGACGCATCG
CGGCTGGACGATCCCGACGCCGACCAGCTGATCGCAGGCGCGGGGCTGGCCGATATCGTCGCCTTTGCCGCCGACGAGGC
GCTGGGCGAGGACGGGTCGAAGCTGATCTCCGAAAACGCCTGGAAAGAGGTGCGCAGCGCGATCAAGGCCGACCCCGAGC
TGCTGAACGGCAAAAGCGTGTTCGAACTGCCCGCGGCGTCCGAAGTCGACATCATGGCGAAGGAAGGCGCGCGCGGCGAA
CTGGGCGCGCGGGTCGACGCGCTGGAAAGGGACGGCAGGCTGTCGACCGGCATCCACTGGCCCTTCTTCAGGAACGCCGA
TGCGACCGACCCCGCGGTCGCGGGCATCTGGGGCGCGCTCAAGGGATCGGTGCTGACGATCTTCATCGCCTTCCTGATTG
CTTTCCCGACCGGGGTGCTCGCGGCGCTCTATCTGGAAGAATATGCACCCAAGAACCGGTGGACCGACCTCATCGAAGTG
TCGATCAACAATCTGGCCGCGGTGCCCTCGATCATCTTTGGCCTGCTCGCGCTCGCGGTGTTCATCAACTGGTTCGGCAT
CTGTCAGGCGAGCCCGCTCGTCGGCGGGCTGACGCTCGCGCTGATGACGATGCCGGTGATCGTGATCGCCAGCCGCAACG
CGATCAAATCGGTGCCGCCGTCGATCCGCGATGCCGCGCTGGGCGTCGGCGCCAGTCCGGTGCAGGTCGTGTTCCACCAC
GTCCTGCCGCTTGCCCTCCCCGGCATCCTCACCGGCACGATCATCGGCATGGCGCGCGCGCTGGGCGAGACGGCGCCGCT
GCTGCTCATCGGGATGCGCGCCTTTATCGGCGACGTGCCGGGCGGCATCTGTTCGCCCTCGACCGTGCTGCCGATGCAGA
TATTCCTCTGGTCGGACGAAGTCGATCGCGGCTTTGTCGAGAAAACCTCCGCCGCGATCATCGTGCTGCTGATTGTCCTG
CTGTCGATGAACGCCTTTGCGATCTATCTTCGCAACAAGTTCGAAAAACGCTGGTGA

Upstream 100 bases:

>100_bases
AAGACGCTCGCCGCCTTTGCGCTTGGCCTTGTGCTGTTCATCGTCACCCTGCTGCTCAACATCGCCGCGCTGCGGATCGT
GAAAAAGTATCGCGAAGCTT

Downstream 100 bases:

>100_bases
AAATGACCCCCCAACCATGACAAACGACGATCTTACCATCACCGATCCCAAGATGCGGGCGCAGGGCGTCAACGTCTTTT
ATGGCGACAAACAGGCGATC

Product: phosphate ABC transporter permease

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNRDTAPTDWKAAAMQKRIAGRYAAERRFKAIGLAAVLLSGAFLAFLLFVMVGNGARGFTYTHVSVPIDFKATPLTIDAS
RLDDPDADQLIAGAGLADIVAFAADEALGEDGSKLISENAWKEVRSAIKADPELLNGKSVFELPAASEVDIMAKEGARGE
LGARVDALERDGRLSTGIHWPFFRNADATDPAVAGIWGALKGSVLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEV
SINNLAAVPSIIFGLLALAVFINWFGICQASPLVGGLTLALMTMPVIVIASRNAIKSVPPSIRDAALGVGASPVQVVFHH
VLPLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVPGGICSPSTVLPMQIFLWSDEVDRGFVEKTSAAIIVLLIVL
LSMNAFAIYLRNKFEKRW

Sequences:

>Translated_418_residues
MNRDTAPTDWKAAAMQKRIAGRYAAERRFKAIGLAAVLLSGAFLAFLLFVMVGNGARGFTYTHVSVPIDFKATPLTIDAS
RLDDPDADQLIAGAGLADIVAFAADEALGEDGSKLISENAWKEVRSAIKADPELLNGKSVFELPAASEVDIMAKEGARGE
LGARVDALERDGRLSTGIHWPFFRNADATDPAVAGIWGALKGSVLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEV
SINNLAAVPSIIFGLLALAVFINWFGICQASPLVGGLTLALMTMPVIVIASRNAIKSVPPSIRDAALGVGASPVQVVFHH
VLPLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVPGGICSPSTVLPMQIFLWSDEVDRGFVEKTSAAIIVLLIVL
LSMNAFAIYLRNKFEKRW
>Mature_418_residues
MNRDTAPTDWKAAAMQKRIAGRYAAERRFKAIGLAAVLLSGAFLAFLLFVMVGNGARGFTYTHVSVPIDFKATPLTIDAS
RLDDPDADQLIAGAGLADIVAFAADEALGEDGSKLISENAWKEVRSAIKADPELLNGKSVFELPAASEVDIMAKEGARGE
LGARVDALERDGRLSTGIHWPFFRNADATDPAVAGIWGALKGSVLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEV
SINNLAAVPSIIFGLLALAVFINWFGICQASPLVGGLTLALMTMPVIVIASRNAIKSVPPSIRDAALGVGASPVQVVFHH
VLPLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVPGGICSPSTVLPMQIFLWSDEVDRGFVEKTSAAIIVLLIVL
LSMNAFAIYLRNKFEKRW

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0581

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790163, Length=224, Percent_Identity=30.3571428571429, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790164, Length=177, Percent_Identity=32.2033898305085, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005672 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 44552; Mature: 44552

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDTAPTDWKAAAMQKRIAGRYAAERRFKAIGLAAVLLSGAFLAFLLFVMVGNGARGFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YTHVSVPIDFKATPLTIDASRLDDPDADQLIAGAGLADIVAFAADEALGEDGSKLISENA
EEEEEEEECCCCCCEEEEHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
WKEVRSAIKADPELLNGKSVFELPAASEVDIMAKEGARGELGARVDALERDGRLSTGIHW
HHHHHHHHCCCHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC
PFFRNADATDPAVAGIWGALKGSVLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SINNLAAVPSIIFGLLALAVFINWFGICQASPLVGGLTLALMTMPVIVIASRNAIKSVPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCHHHHCCC
SIRDAALGVGASPVQVVFHHVLPLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVP
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
GGICSPSTVLPMQIFLWSDEVDRGFVEKTSAAIIVLLIVLLSMNAFAIYLRNKFEKRW
CCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRDTAPTDWKAAAMQKRIAGRYAAERRFKAIGLAAVLLSGAFLAFLLFVMVGNGARGFT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YTHVSVPIDFKATPLTIDASRLDDPDADQLIAGAGLADIVAFAADEALGEDGSKLISENA
EEEEEEEECCCCCCEEEEHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
WKEVRSAIKADPELLNGKSVFELPAASEVDIMAKEGARGELGARVDALERDGRLSTGIHW
HHHHHHHHCCCHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC
PFFRNADATDPAVAGIWGALKGSVLTIFIAFLIAFPTGVLAALYLEEYAPKNRWTDLIEV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SINNLAAVPSIIFGLLALAVFINWFGICQASPLVGGLTLALMTMPVIVIASRNAIKSVPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCHHHHCCC
SIRDAALGVGASPVQVVFHHVLPLALPGILTGTIIGMARALGETAPLLLIGMRAFIGDVP
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
GGICSPSTVLPMQIFLWSDEVDRGFVEKTSAAIIVLLIVLLSMNAFAIYLRNKFEKRW
CCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]