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The map label for this gene is nrdR

Identifier: 103486281

GI number: 103486281

Start: 796358

End: 796825

Strand: Reverse

Name: nrdR

Synonym: Sala_0789

Alternate gene names: 103486281

Gene position: 796825-796358 (Counterclockwise)

Preceding gene: 103486282

Following gene: 103486280

Centisome position: 23.82

GC content: 64.1

Gene sequence:

>468_bases
ATGCGGTGTCCTTATTGCGGCCATGAAGACAGCCAGGTCAAGGACAGCCGTCCGACCGAAGATGGCGCGGCGATCCGCCG
CCGCCGCCAGTGCGAGGATTGCGGCGCGCGCTTCACGACGTTCGAGCGCATCCAGCTGCGCGAGGTCGTGGTGATCAAGG
CCGGCGGGACGCGCGAGCCGTTCGATCGCGAAAAACTGATGCGCAGCGTCCAGATCGCATGCCGCAAGCGCCCGATCGAC
GGCGCGCGGATCGAACGGCTGGTATCGGGCATCCAGCGCCAGCTCGAAACATCGGGCGAGAATGAGGTGCAGGCATCGCA
GATCGGCGCGATGGTGATGGAAGCGCTCAAGGGCTTCGACAATGTCGCCTATATCCGCTTCGCCAGCGTCTACCGCGATT
TCACCGAAGCCAGGGATTTCGAAGAGTTCGCCTCGACGATCACCGAGGCGGCGCGGCCGATCAAATGA

Upstream 100 bases:

>100_bases
CGGTGCGGTTGCGGGTGCGGTGCTACCGGTGGTGAGCTGGCCCGTCGGCCTGTTCGCGGGTGCGGCCATCGCGCTTTATA
CGCGGGTGAAGCGCTGACCC

Downstream 100 bases:

>100_bases
CCGCGGCTGCCCCGCCCCCCGTCATCGTCCTCGTCCGACCGCAGCTTGGCGAGAATATCGGCAAGGCGGCGCGGGCCATG
CTCAATTTCGGGCTGACCGA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRCPYCGHEDSQVKDSRPTEDGAAIRRRRQCEDCGARFTTFERIQLREVVVIKAGGTREPFDREKLMRSVQIACRKRPID
GARIERLVSGIQRQLETSGENEVQASQIGAMVMEALKGFDNVAYIRFASVYRDFTEARDFEEFASTITEAARPIK

Sequences:

>Translated_155_residues
MRCPYCGHEDSQVKDSRPTEDGAAIRRRRQCEDCGARFTTFERIQLREVVVIKAGGTREPFDREKLMRSVQIACRKRPID
GARIERLVSGIQRQLETSGENEVQASQIGAMVMEALKGFDNVAYIRFASVYRDFTEARDFEEFASTITEAARPIK
>Mature_155_residues
MRCPYCGHEDSQVKDSRPTEDGAAIRRRRQCEDCGARFTTFERIQLREVVVIKAGGTREPFDREKLMRSVQIACRKRPID
GARIERLVSGIQRQLETSGENEVQASQIGAMVMEALKGFDNVAYIRFASVYRDFTEARDFEEFASTITEAARPIK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=142, Percent_Identity=47.1830985915493, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_SPHAL (Q1GV13)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615842.1
- GeneID:   4080433
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0789
- NMPDR:   fig|317655.9.peg.735
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- BioCyc:   SALA317655:SALA_0789-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 17696; Mature: 17696

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPYCGHEDSQVKDSRPTEDGAAIRRRRQCEDCGARFTTFERIQLREVVVIKAGGTREP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCC
FDREKLMRSVQIACRKRPIDGARIERLVSGIQRQLETSGENEVQASQIGAMVMEALKGFD
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
NVAYIRFASVYRDFTEARDFEEFASTITEAARPIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRCPYCGHEDSQVKDSRPTEDGAAIRRRRQCEDCGARFTTFERIQLREVVVIKAGGTREP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCC
FDREKLMRSVQIACRKRPIDGARIERLVSGIQRQLETSGENEVQASQIGAMVMEALKGFD
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
NVAYIRFASVYRDFTEARDFEEFASTITEAARPIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA