| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486263
Identifier: 103486263
GI number: 103486263
Start: 778119
End: 778415
Strand: Reverse
Name: 103486263
Synonym: Sala_0771
Alternate gene names: NA
Gene position: 778415-778119 (Counterclockwise)
Preceding gene: 103486264
Following gene: 103486262
Centisome position: 23.27
GC content: 68.01
Gene sequence:
>297_bases ATGAAATTGCTCACCGGCAACGACCTGAAAAGCGGCGCCGTCATCTGGTGGACCGGCCACGACTGGTCGATCCATGTCGA GGATGCCGCCGACGTCGGCGAGCATGGCGAGGCGATCCTCGCCGTCGAGGAGGCCGCGCGCCGCGTCAACGCGCCCTATA TCATCGCGGGCGAGATGACCCCCGACGGTCCGCGCCCCGCGCATATCAAGGACCGCATCCGCGCGTTGGGGCCGACCGTG CGCCCCGACCTGACATTGAAACCCGCCGATCCGACGGCCGGCGACTGGGTGATCTGA
Upstream 100 bases:
>100_bases AAAGCCCGGCGCTGATCATCGTCGGCAAGGTCGCGGCGCGCGCCGATGCGCTCGACTGCCTCGGCGCGCCTGGCGTCGCC GCTCAAATAAGGGATTTCAC
Downstream 100 bases:
>100_bases CATGTATAAATATGACGAATATGATCAGGCGATGGTCGAGGCGCGCGTCGCCGAGTTCAGCGACCAGGTGCGCCGCCGCC TCGCGGGCGAAATCACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKLLTGNDLKSGAVIWWTGHDWSIHVEDAADVGEHGEAILAVEEAARRVNAPYIIAGEMTPDGPRPAHIKDRIRALGPTV RPDLTLKPADPTAGDWVI
Sequences:
>Translated_98_residues MKLLTGNDLKSGAVIWWTGHDWSIHVEDAADVGEHGEAILAVEEAARRVNAPYIIAGEMTPDGPRPAHIKDRIRALGPTV RPDLTLKPADPTAGDWVI >Mature_98_residues MKLLTGNDLKSGAVIWWTGHDWSIHVEDAADVGEHGEAILAVEEAARRVNAPYIIAGEMTPDGPRPAHIKDRIRALGPTV RPDLTLKPADPTAGDWVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10612; Mature: 10612
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLTGNDLKSGAVIWWTGHDWSIHVEDAADVGEHGEAILAVEEAARRVNAPYIIAGEMT CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCEEEECCCC PDGPRPAHIKDRIRALGPTVRPDLTLKPADPTAGDWVI CCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKLLTGNDLKSGAVIWWTGHDWSIHVEDAADVGEHGEAILAVEEAARRVNAPYIIAGEMT CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCEEEECCCC PDGPRPAHIKDRIRALGPTVRPDLTLKPADPTAGDWVI CCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA