| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mro [H]
Identifier: 103486230
GI number: 103486230
Start: 742845
End: 743924
Strand: Reverse
Name: mro [H]
Synonym: Sala_0738
Alternate gene names: 103486230
Gene position: 743924-742845 (Counterclockwise)
Preceding gene: 103486232
Following gene: 103486229
Centisome position: 22.24
GC content: 58.06
Gene sequence:
>1080_bases TTGCACCACAGCACAGCAACCGAGACCGAGTTCGGAACGCTCGACAATGGGGACATTGTGAAGCGCATCAAGCTCGCAAA TGAAAGCGGCATGTCGGTAGGAATCATCACCTACGGCGCGTCCCTGCAATCGGTCTGCGTTCCCGACCGATATGGTGTAT TTGCCGATGTCGCAGCGGGTTATGCCACGCTCGACGACTATCTCCGCAAGCCGCAGTATTTCGGATCGACCGTCGGGCGG GTCGCCAATCGGCTCGCGAAGGCCCGTTTCACATTGAACGGCAAAGATTATGTGGTTTCGGCCAATGATGGCTCCAATTC GCTCCATGGCGGAGCACGGGGATTCGACAAGGTCAACTGGACCGTGACCCACAGGAGCGATCGGTCGGTCACCATGCAAT ATGTCAGTCCCGACGGCGATCAGGGCTATCCCGGCACCTTGACCGTCGGCGCAACCTATGCACTTGGCGCAGACAATGAA TTGAGCGTCCACTACCGCGCCACCACCGACGCGACCACCCTGGTTAACCTGTCAAACCATGTTTACTGGAATCTGGGCGG GGAAGGCGCGGCCTATAGCGCGATGGGCCACCGTCTGACGATCCACGCGGATCATTTTCTCCCCGTTGATTCCGAGCTGA TCCCGACCGGTGAAATGCGTCATGTCGAAGACAGTCTGTTCGATTTTCGCATGGGCAAGGTCATCGGCGACGATGTTGGC AGGATGGACGATGAGCAACTCGGCTTCGGTCTGGGTTATGATCATAATTGGGTCGTCGGCGACGAAGTTGCCGCCGCGCC GCGGCCGGTGGCAAAGCTGATTGATCCCCGTTCGGGGCGAGCCATGACTTTGCTGTCCAACCAACCCGGCCTGCAATTCT ACTCGGGCAACTTCTTTGACGGCACGACGCGGGGCAAGGCGGGAAAGTCCTATTGCCGCGGCGATGCCATCGCACTCGAG CCGCAACAATTTCCCGATGCGCCCAACCAGCCTGGCTTCGGCTCAATAGCACTTCAACCCGGCCAAACCTATTCCAACAT GATTATCTGGCGATTTGAATTGTCGGAGGAGCGATCATGA
Upstream 100 bases:
>100_bases TCGCGGCGGTCTGTGGTTCGACAGCCACCACCCCCAATCCCGCCTGTTGTCTGCCTCGATCGTTTATCATATAAATCATC TCAATTGGAAAGGGGTTAGT
Downstream 100 bases:
>100_bases GGGCAGAAAAATCGGCATTATTTCTCGCGCTCATGGTGCTGGGCGGCTGTGCAACGGCGCCTGGGAGGCCGACTATAAGC AATCCTGTCATCGACGAAAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MHHSTATETEFGTLDNGDIVKRIKLANESGMSVGIITYGASLQSVCVPDRYGVFADVAAGYATLDDYLRKPQYFGSTVGR VANRLAKARFTLNGKDYVVSANDGSNSLHGGARGFDKVNWTVTHRSDRSVTMQYVSPDGDQGYPGTLTVGATYALGADNE LSVHYRATTDATTLVNLSNHVYWNLGGEGAAYSAMGHRLTIHADHFLPVDSELIPTGEMRHVEDSLFDFRMGKVIGDDVG RMDDEQLGFGLGYDHNWVVGDEVAAAPRPVAKLIDPRSGRAMTLLSNQPGLQFYSGNFFDGTTRGKAGKSYCRGDAIALE PQQFPDAPNQPGFGSIALQPGQTYSNMIIWRFELSEERS
Sequences:
>Translated_359_residues MHHSTATETEFGTLDNGDIVKRIKLANESGMSVGIITYGASLQSVCVPDRYGVFADVAAGYATLDDYLRKPQYFGSTVGR VANRLAKARFTLNGKDYVVSANDGSNSLHGGARGFDKVNWTVTHRSDRSVTMQYVSPDGDQGYPGTLTVGATYALGADNE LSVHYRATTDATTLVNLSNHVYWNLGGEGAAYSAMGHRLTIHADHFLPVDSELIPTGEMRHVEDSLFDFRMGKVIGDDVG RMDDEQLGFGLGYDHNWVVGDEVAAAPRPVAKLIDPRSGRAMTLLSNQPGLQFYSGNFFDGTTRGKAGKSYCRGDAIALE PQQFPDAPNQPGFGSIALQPGQTYSNMIIWRFELSEERS >Mature_359_residues MHHSTATETEFGTLDNGDIVKRIKLANESGMSVGIITYGASLQSVCVPDRYGVFADVAAGYATLDDYLRKPQYFGSTVGR VANRLAKARFTLNGKDYVVSANDGSNSLHGGARGFDKVNWTVTHRSDRSVTMQYVSPDGDQGYPGTLTVGATYALGADNE LSVHYRATTDATTLVNLSNHVYWNLGGEGAAYSAMGHRLTIHADHFLPVDSELIPTGEMRHVEDSLFDFRMGKVIGDDVG RMDDEQLGFGLGYDHNWVVGDEVAAAPRPVAKLIDPRSGRAMTLLSNQPGLQFYSGNFFDGTTRGKAGKSYCRGDAIALE PQQFPDAPNQPGFGSIALQPGQTYSNMIIWRFELSEERS
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=353, Percent_Identity=41.3597733711048, Blast_Score=258, Evalue=6e-69, Organism=Escherichia coli, GI1786971, Length=344, Percent_Identity=36.046511627907, Blast_Score=213, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17557428, Length=331, Percent_Identity=32.9305135951662, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115533334, Length=331, Percent_Identity=32.9305135951662, Blast_Score=199, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319493, Length=306, Percent_Identity=27.7777777777778, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324399, Length=348, Percent_Identity=24.4252873563218, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322004, Length=344, Percent_Identity=25.8720930232558, Blast_Score=86, Evalue=7e-18, Organism=Drosophila melanogaster, GI24668278, Length=343, Percent_Identity=39.067055393586, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24668282, Length=350, Percent_Identity=40.5714285714286, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24659048, Length=351, Percent_Identity=39.8860398860399, Blast_Score=237, Evalue=8e-63, Organism=Drosophila melanogaster, GI24583720, Length=361, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24641876, Length=349, Percent_Identity=33.810888252149, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39026; Mature: 39026
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00636 DNAJ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHSTATETEFGTLDNGDIVKRIKLANESGMSVGIITYGASLQSVCVPDRYGVFADVAAG CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHCC YATLDDYLRKPQYFGSTVGRVANRLAKARFTLNGKDYVVSANDGSNSLHGGARGFDKVNW HHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEE TVTHRSDRSVTMQYVSPDGDQGYPGTLTVGATYALGADNELSVHYRATTDATTLVNLSNH EEEECCCCEEEEEEECCCCCCCCCCEEEECEEEEECCCCEEEEEEEECCCCEEEEEECCE VYWNLGGEGAAYSAMGHRLTIHADHFLPVDSELIPTGEMRHVEDSLFDFRMGKVIGDDVG EEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RMDDEQLGFGLGYDHNWVVGDEVAAAPRPVAKLIDPRSGRAMTLLSNQPGLQFYSGNFFD CCCHHHCCEECCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCEEECCCEEC GTTRGKAGKSYCRGDAIALEPQQFPDAPNQPGFGSIALQPGQTYSNMIIWRFELSEERS CCCCCCCCCHHHCCCEEEECHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MHHSTATETEFGTLDNGDIVKRIKLANESGMSVGIITYGASLQSVCVPDRYGVFADVAAG CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHCC YATLDDYLRKPQYFGSTVGRVANRLAKARFTLNGKDYVVSANDGSNSLHGGARGFDKVNW HHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEE TVTHRSDRSVTMQYVSPDGDQGYPGTLTVGATYALGADNELSVHYRATTDATTLVNLSNH EEEECCCCEEEEEEECCCCCCCCCCEEEECEEEEECCCCEEEEEEEECCCCEEEEEECCE VYWNLGGEGAAYSAMGHRLTIHADHFLPVDSELIPTGEMRHVEDSLFDFRMGKVIGDDVG EEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RMDDEQLGFGLGYDHNWVVGDEVAAAPRPVAKLIDPRSGRAMTLLSNQPGLQFYSGNFFD CCCHHHCCEECCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCEEECCCEEC GTTRGKAGKSYCRGDAIALEPQQFPDAPNQPGFGSIALQPGQTYSNMIIWRFELSEERS CCCCCCCCCHHHCCCEEEECHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]