| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486184
Identifier: 103486184
GI number: 103486184
Start: 697770
End: 698096
Strand: Direct
Name: 103486184
Synonym: Sala_0691
Alternate gene names: NA
Gene position: 697770-698096 (Clockwise)
Preceding gene: 103486175
Following gene: 103486185
Centisome position: 20.86
GC content: 66.36
Gene sequence:
>327_bases ATGCCAAGCTTGCCAAACAGATTGCATCCGGCTGTGGACGCAAGGAGTGGCCCGGAACTAGCCCGGATGCTCGCCTACAT CGTGACGCCGACGCCGGTTCACCAGGTGCGTGGTGGCCAGCATGACGGCGCCGAGCGACGTCAGCAGTCGGTCGGCGGTT TGCGCGTCGGGCAACGCCAACCAGCCTTCGTGCGCGGCGAGGCCAGCCGCAAGAAAGCTGATGCCGACGACCGCGAGGAG GGTGGGGCATTGTGCCCGTGCCGCTGCCGCCCTCCATTGATGGCGATGGCCGCGGTCGGGAGCGCAATCATCAATATCGC TGCGTGA
Upstream 100 bases:
>100_bases ATCAGGGCACGGAATAAAGGCGGCATTGGTCAGGCTCCCTTGTTAATAAGTAAAGGAACATTGACACAGCGAATCGAAAT TGTCAAGCAACATTGACTAA
Downstream 100 bases:
>100_bases ACCCCGTCGGGCAGGTGGAGCCAGCTGCCGAGCGCGGGTGCGACCAGCAGCGCGAGCGGAAGCGCAAGGCAGTGGACGAG GCAGGCGGACGACAGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPSLPNRLHPAVDARSGPELARMLAYIVTPTPVHQVRGGQHDGAERRQQSVGGLRVGQRQPAFVRGEASRKKADADDREE GGALCPCRCRPPLMAMAAVGSAIINIAA
Sequences:
>Translated_108_residues MPSLPNRLHPAVDARSGPELARMLAYIVTPTPVHQVRGGQHDGAERRQQSVGGLRVGQRQPAFVRGEASRKKADADDREE GGALCPCRCRPPLMAMAAVGSAIINIAA >Mature_107_residues PSLPNRLHPAVDARSGPELARMLAYIVTPTPVHQVRGGQHDGAERRQQSVGGLRVGQRQPAFVRGEASRKKADADDREEG GALCPCRCRPPLMAMAAVGSAIINIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11490; Mature: 11359
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLPNRLHPAVDARSGPELARMLAYIVTPTPVHQVRGGQHDGAERRQQSVGGLRVGQRQ CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCC PAFVRGEASRKKADADDREEGGALCPCRCRPPLMAMAAVGSAIINIAA CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSLPNRLHPAVDARSGPELARMLAYIVTPTPVHQVRGGQHDGAERRQQSVGGLRVGQRQ CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCC PAFVRGEASRKKADADDREEGGALCPCRCRPPLMAMAAVGSAIINIAA CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA