Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486155

Identifier: 103486155

GI number: 103486155

Start: 673643

End: 674458

Strand: Reverse

Name: 103486155

Synonym: Sala_0662

Alternate gene names: NA

Gene position: 674458-673643 (Counterclockwise)

Preceding gene: 103486159

Following gene: 103486147

Centisome position: 20.16

GC content: 68.01

Gene sequence:

>816_bases
ATGCCCCTGCGTTTCAAGCGCCCCCTTTCCATCGCATTCGGTGCATTTGCGACGACGATGCTTTCCGGCTGCTATTATGG
CGACGTCCATGGCGCCAGCTACGCTTCGCGCGGCGATTGCGCGGCGCGCTACGGCGACGCTTATTATGACTATGACGGCT
ATGCCTATGACGACGGCTATGGCTATGATTGCTATGATGCGTCGGATTATGGCAGCGGCTTTGTCCAGATCGGCTTTGGC
GGCGGCTGGTACGACGATTATTATTACCCCGGCCACGGGCTATGGATGTTCGACCGCTATCGCAACCGCTATCCGCTGCG
CGACCATTATCTGAACTATTGGGGCGGGCGGCGCGCTTGGTGGAAATATCATGGCAAGCACGGCGACTGGAAACCCGGTC
GCCCCGGCTGGCATCGCGACCGCGATGACGACCGCGAGCGCGATGACCGGCGGCCGGGCTGGAACCGCGGCGACCGCGAC
GGTGACGGCCCGCGCGGCACGCGCCCGCGCCGCTCCACCGAAGCCATGACCGGCACGCCGCGCGCGATCCGTAATCTGCC
TGCCACCGAACCGGGCGAGATATATTCGCGGCCGCGCGGGCGGGTCGAGACACGCGCGACGCAACGCTCGCATCGGCAAT
GGCCGCGGAGCGCCGTCGCCCCGCCCGCCGCGGCGCCGGTCACAGGGAGCACGCCCCCTGTCGCGCGCCCAGCCGTTCGG
CCGGCTCCGCCGCCGAGAGCGGACACGCCATCGGCGCCCCCGCCCCCCGCGCGCGCCAACCGCGTCGACCGGCCCAACAA
AGTGCGCGATCAATAG

Upstream 100 bases:

>100_bases
GTGCAAGTAACGTATCGCACACCATTCACCGCAAATTCAACTCGGCTCGGGCAGGTTCGGCGCGAGGGTCGCAATTCATC
GCCCCGAAAAGGACCGAGCC

Downstream 100 bases:

>100_bases
CCAAAAGGATCAGCCGGGGCTGTCCCCTTCCGGCCGATCGTCGATCCCGGCCGAAACGACCGTCGCCGCGACAAGGTCGC
CGATGACGTTCAGCGTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPLRFKRPLSIAFGAFATTMLSGCYYGDVHGASYASRGDCAARYGDAYYDYDGYAYDDGYGYDCYDASDYGSGFVQIGFG
GGWYDDYYYPGHGLWMFDRYRNRYPLRDHYLNYWGGRRAWWKYHGKHGDWKPGRPGWHRDRDDDRERDDRRPGWNRGDRD
GDGPRGTRPRRSTEAMTGTPRAIRNLPATEPGEIYSRPRGRVETRATQRSHRQWPRSAVAPPAAAPVTGSTPPVARPAVR
PAPPPRADTPSAPPPPARANRVDRPNKVRDQ

Sequences:

>Translated_271_residues
MPLRFKRPLSIAFGAFATTMLSGCYYGDVHGASYASRGDCAARYGDAYYDYDGYAYDDGYGYDCYDASDYGSGFVQIGFG
GGWYDDYYYPGHGLWMFDRYRNRYPLRDHYLNYWGGRRAWWKYHGKHGDWKPGRPGWHRDRDDDRERDDRRPGWNRGDRD
GDGPRGTRPRRSTEAMTGTPRAIRNLPATEPGEIYSRPRGRVETRATQRSHRQWPRSAVAPPAAAPVTGSTPPVARPAVR
PAPPPRADTPSAPPPPARANRVDRPNKVRDQ
>Mature_270_residues
PLRFKRPLSIAFGAFATTMLSGCYYGDVHGASYASRGDCAARYGDAYYDYDGYAYDDGYGYDCYDASDYGSGFVQIGFGG
GWYDDYYYPGHGLWMFDRYRNRYPLRDHYLNYWGGRRAWWKYHGKHGDWKPGRPGWHRDRDDDRERDDRRPGWNRGDRDG
DGPRGTRPRRSTEAMTGTPRAIRNLPATEPGEIYSRPRGRVETRATQRSHRQWPRSAVAPPAAAPVTGSTPPVARPAVRP
APPPRADTPSAPPPPARANRVDRPNKVRDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30860; Mature: 30729

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRFKRPLSIAFGAFATTMLSGCYYGDVHGASYASRGDCAARYGDAYYDYDGYAYDDGY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCEEECCCC
GYDCYDASDYGSGFVQIGFGGGWYDDYYYPGHGLWMFDRYRNRYPLRDHYLNYWGGRRAW
CCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEHHHCCCCCHHHHHHHHCCCCEEE
WKYHGKHGDWKPGRPGWHRDRDDDRERDDRRPGWNRGDRDGDGPRGTRPRRSTEAMTGTP
EEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCH
RAIRNLPATEPGEIYSRPRGRVETRATQRSHRQWPRSAVAPPAAAPVTGSTPPVARPAVR
HHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
PAPPPRADTPSAPPPPARANRVDRPNKVRDQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLRFKRPLSIAFGAFATTMLSGCYYGDVHGASYASRGDCAARYGDAYYDYDGYAYDDGY
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCEEECCCC
GYDCYDASDYGSGFVQIGFGGGWYDDYYYPGHGLWMFDRYRNRYPLRDHYLNYWGGRRAW
CCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEHHHCCCCCHHHHHHHHCCCCEEE
WKYHGKHGDWKPGRPGWHRDRDDDRERDDRRPGWNRGDRDGDGPRGTRPRRSTEAMTGTP
EEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCH
RAIRNLPATEPGEIYSRPRGRVETRATQRSHRQWPRSAVAPPAAAPVTGSTPPVARPAVR
HHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
PAPPPRADTPSAPPPPARANRVDRPNKVRDQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA