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The map label for this gene is clpS [H]

Identifier: 103485996

GI number: 103485996

Start: 520607

End: 520972

Strand: Reverse

Name: clpS [H]

Synonym: Sala_0503

Alternate gene names: 103485996

Gene position: 520972-520607 (Counterclockwise)

Preceding gene: 103485997

Following gene: 103485994

Centisome position: 15.57

GC content: 61.48

Gene sequence:

>366_bases
ATGATGCTTCCCGCTTCGAGCCCCCATATGGTCCGCGCCATGGCGGACAAGGACGACGATGCCACCGGCACGCCCGGCGT
CGGCATCGCGACGCGCACGCGCGCGAAGCCAAAAAAACCATCGATGTACAAGGTGCTGCTGCTCAACGACGATTATACGC
CGATGGAGTTCGTCGTGATGGTGCTGCAACGCTTTTTCAACATGGACATCGAACGCGCGACCCAGGTGATGCTGCACGTC
CACCAGCAGGGCGTCGGCGTGTGCGGCGTGTTCAGCTACGAAGTCGCCGAAACCAAGGTCAATCAGGTGATGGACGCCGC
GCGGCAGAACCAGCACCCGCTGCAATGCACGCTGGAAAAGGCGTGA

Upstream 100 bases:

>100_bases
GGCGGTTCTTGTTTGGCGCCCCGACCGCGGCGTGCGAAAAGGGGGTTAATGCGGCACCGCGCCCCTTGCGATTCCGCCCC
GGCTTGCGATATTCCCCGTG

Downstream 100 bases:

>100_bases
CCCTAGGCGCCCCTGGCCGCCTGCTCGGCCCTGAGCGCTGCGGAGAGCTCCCCTTTCAGATCACCGTAGCGCAGTAACTC
GCCGCAGCCGGGACAGACTG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MMLPASSPHMVRAMADKDDDATGTPGVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVMVLQRFFNMDIERATQVMLHV
HQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEKA

Sequences:

>Translated_121_residues
MMLPASSPHMVRAMADKDDDATGTPGVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVMVLQRFFNMDIERATQVMLHV
HQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEKA
>Mature_121_residues
MMLPASSPHMVRAMADKDDDATGTPGVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVMVLQRFFNMDIERATQVMLHV
HQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=90, Percent_Identity=66.6666666666667, Blast_Score=129, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13526; Mature: 13526

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLPASSPHMVRAMADKDDDATGTPGVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVM
CCCCCCCCHHEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCHHHHHHH
VLQRFFNMDIERATQVMLHVHQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEK
HHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
A
C
>Mature Secondary Structure
MMLPASSPHMVRAMADKDDDATGTPGVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVM
CCCCCCCCHHEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCHHHHHHH
VLQRFFNMDIERATQVMLHVHQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEK
HHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA