| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485944
Identifier: 103485944
GI number: 103485944
Start: 462047
End: 462814
Strand: Reverse
Name: 103485944
Synonym: Sala_0451
Alternate gene names: NA
Gene position: 462814-462047 (Counterclockwise)
Preceding gene: 103485945
Following gene: 103485941
Centisome position: 13.84
GC content: 66.02
Gene sequence:
>768_bases ATGCCGTTCGTCCTCGCTCTTGCCCTGCTCGCCGACTCCCCGGCTGCGACGCCAGCCCCGCCGCCGCGGGTCGAACGCTG CGGCTACCGCATCGTCCAATCCTTTCCGCACGACCCGTCATCCTTCACCCAGGGCCTCTTCTGGCACGATGGGCATCTTT ACGAAGCGACAGGGCAGTACGGGCAATCGCGTGTCGCGCGGCTCGACCTCAAGACCGGCAAGGCGCTCGTCGAAACGCCA TTGCCATCCGACCAGTTCGGCGAAGGCATCACCCGCTGGGGCGACCAGATCATTGGTGTGACGTGGAAGAACGGAATTGG CCACCGCTGGCGGATCAGGGATCTGAAACCGCTCGGCACCTTCCGCTATGCCGGCGAGGGGTGGGGAGTGACGATGGTCG GCAAGGATCTGGTGCTCAGCGACGGCACGCCGCAGCTGCGCTTTCTGGACCCGGCGACCATGGTCGAACGGCGCCGCGTC ACCGTGCGCTTCGCCGGGCGCCCGGTGGCGATGATCAACGAGCTCGAAACGATCGACGGCCGGATCTGGGCGAATGTCTG GATGACCGACTTCATCGTCCAGATCGACCCCGCGACCGGCGACGTCGCCGCGATCATCGACCTGTCGGGCCTGCACGCCG ACGCGGGGGCGCGGGGCACCGACGGCGTGCTCAACGGCATCGCCTGGGATGCAAATGCGAAGCGGCTGTTTGTCACCGGC AAATACTGGCCGAAGCTCTACGAAATAGCGCTGGCGAATTGCCGCTAG
Upstream 100 bases:
>100_bases GACTGCGCCACGGCGCTGGATGGCGGATCGAGCCCGGCCGGGCGAAAGCGGGGCAGCGGGACATTGCCAGTTCAGCCCCG CCCACCTAGCTAGGGCGGCG
Downstream 100 bases:
>100_bases CGCGCCCTCTTGTTTGAGCGAATCGATTGGGGATTCAGACAGCGTTGATTTTCCGATTCGACCTGTTGGCTGCGCGGGAG GCCAACAGGGACCAGCCGAG
Product: glutamine cyclotransferase
Products: NA
Alternate protein names: Glutaminyl-Peptide Cyclotransferase; Glutamine Cyclotransferase Superfamily; Glutaminyl-Peptide Cyclotransferase Family Protein; Glutamine Cyclotransferase Family Protein; Glutamine Cyclotransferase-Like; Glutamine Cyclotransferase Superfamily Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPFVLALALLADSPAATPAPPPRVERCGYRIVQSFPHDPSSFTQGLFWHDGHLYEATGQYGQSRVARLDLKTGKALVETP LPSDQFGEGITRWGDQIIGVTWKNGIGHRWRIRDLKPLGTFRYAGEGWGVTMVGKDLVLSDGTPQLRFLDPATMVERRRV TVRFAGRPVAMINELETIDGRIWANVWMTDFIVQIDPATGDVAAIIDLSGLHADAGARGTDGVLNGIAWDANAKRLFVTG KYWPKLYEIALANCR
Sequences:
>Translated_255_residues MPFVLALALLADSPAATPAPPPRVERCGYRIVQSFPHDPSSFTQGLFWHDGHLYEATGQYGQSRVARLDLKTGKALVETP LPSDQFGEGITRWGDQIIGVTWKNGIGHRWRIRDLKPLGTFRYAGEGWGVTMVGKDLVLSDGTPQLRFLDPATMVERRRV TVRFAGRPVAMINELETIDGRIWANVWMTDFIVQIDPATGDVAAIIDLSGLHADAGARGTDGVLNGIAWDANAKRLFVTG KYWPKLYEIALANCR >Mature_254_residues PFVLALALLADSPAATPAPPPRVERCGYRIVQSFPHDPSSFTQGLFWHDGHLYEATGQYGQSRVARLDLKTGKALVETPL PSDQFGEGITRWGDQIIGVTWKNGIGHRWRIRDLKPLGTFRYAGEGWGVTMVGKDLVLSDGTPQLRFLDPATMVERRRVT VRFAGRPVAMINELETIDGRIWANVWMTDFIVQIDPATGDVAAIIDLSGLHADAGARGTDGVLNGIAWDANAKRLFVTGK YWPKLYEIALANCR
Specific function: Unknown
COG id: COG3823
COG function: function code O; Glutamine cyclotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28157; Mature: 28025
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVLALALLADSPAATPAPPPRVERCGYRIVQSFPHDPSSFTQGLFWHDGHLYEATGQY CCHHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCEEEECCCCC GQSRVARLDLKTGKALVETPLPSDQFGEGITRWGDQIIGVTWKNGIGHRWRIRDLKPLGT CCCCEEEEECCCCCEEEECCCCCHHHCCHHHHHCCEEEEEEECCCCCCEEEEECCCCCCC FRYAGEGWGVTMVGKDLVLSDGTPQLRFLDPATMVERRRVTVRFAGRPVAMINELETIDG EEECCCCCEEEEECCEEEEECCCCCEEEECHHHHHHHCEEEEEECCCCCHHHHHHHHHCC RIWANVWMTDFIVQIDPATGDVAAIIDLSGLHADAGARGTDGVLNGIAWDANAKRLFVTG EEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCEEECCCCCEEEEEC KYWPKLYEIALANCR CCCHHEEHHHHCCCC >Mature Secondary Structure PFVLALALLADSPAATPAPPPRVERCGYRIVQSFPHDPSSFTQGLFWHDGHLYEATGQY CHHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCEEEECCCCC GQSRVARLDLKTGKALVETPLPSDQFGEGITRWGDQIIGVTWKNGIGHRWRIRDLKPLGT CCCCEEEEECCCCCEEEECCCCCHHHCCHHHHHCCEEEEEEECCCCCCEEEEECCCCCCC FRYAGEGWGVTMVGKDLVLSDGTPQLRFLDPATMVERRRVTVRFAGRPVAMINELETIDG EEECCCCCEEEEECCEEEEECCCCCEEEECHHHHHHHCEEEEEECCCCCHHHHHHHHHCC RIWANVWMTDFIVQIDPATGDVAAIIDLSGLHADAGARGTDGVLNGIAWDANAKRLFVTG EEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCEEECCCCCEEEEEC KYWPKLYEIALANCR CCCHHEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA